Caenorhabditis briggsae (nematode): CBG_00935
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Entry
CBG_00935 CDS
T01054
Symbol
Cbr-dpl-1
Name
(RefSeq) Protein CBR-DPL-1
KO
K04683
transcription factor Dp-1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03083
Polycomb repressive complex
cbr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CBG_00935 (Cbr-dpl-1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
CBG_00935 (Cbr-dpl-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_00935 (Cbr-dpl-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_00935 (Cbr-dpl-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
CBG_00935 (Cbr-dpl-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CBG_00935 (Cbr-dpl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Sipho_tail
Motif
Other DBs
NCBI-GeneID:
8573148
NCBI-ProteinID:
XP_045091705
WormBase:
CBG00935
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Position
II:593573..597904
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AA seq
603 aa
AA seq
DB search
MNQYQYDSRRPHTSSSGPKRYMATGLPRGNLFQDDGYGDQQWDDMPSAPSGGGGGGSTEK
PTGLRHFSTKVCEKVKEKGLTNYNEVADELVADYFHSNVLKHVDVVVKTRIRHENIRRRV
YDALNVLLAMNIITKNKKDIRWIGLPASASQEIARLEEEKTRREASIRAKKDALQEMVMQ
IVSYKNLVERNRRNEHRNGRPEQDTLLHLPFLIINTDKETNVECSVSSDKSEFLFSFDKK
FEIHDDFEVLKSEFHLEFAAKKSDFPLEMKLACGLDTGNPTDEELITAKSFLPSLHQAYV
DEIVTTYKEREAEREEKEKQMLLLAQRQQQIAQMQYYDPETGSMGNRYNRQLQEHLIADE
DRNAAAGIMERDEDLVVPMERNAVRGGPMYNSSGYSPQKTTAMRVIQQQPSATRRYYVQK
GTGAPGPMGREMSPAIRTMSRPYTSTIPQQRMAAGGGTVGAGGGPVKYYVPQPSGVGPGP
SSSSMAPRYKIRTPSQSTPGQRVTYSAGAGGLSSAHLQPGQRIVTQRIVQSGGPHPPRTV
VRKVIRKIVVNPGGGAKQSPAQQVIQKKMMEQEMQDRKPDMPMTSAQAAAMIQHEPPSDY
DYF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtaccaatacgactctcgtcgtccgcacacctcctcatccggtcccaaaaga
tatatggccacaggcctgccacgtggcaatctgttccaagacgacggatacggagatcaa
cagtgggacgatatgccatcagctccgagcggtggtggaggtgggggatcgacggagaag
ccaacaggactgcggcatttttcaacaaaagtttgcgaaaaagtcaaagagaaaggccta
acaaactataatgaagtggctgacgagctggttgccgactattttcatagtaacgtgttg
aagcatgttgacgtggtggtgaaaacaagaatacgacatgaaaacattcgtcggcgtgtc
tacgacgctctcaacgtccttctggcgatgaacattatcacaaagaacaaaaaagacatt
cgttggatcggtcttccagcgtcggcgtcccaggaaatagcgcggttggaggaggaaaaa
acgcggcgcgaggcgtcgattcgagcgaaaaaggacgcgttgcaggagatggtcatgcaa
attgtgtcgtacaaaaatttggtggaaaggaatcgacggaatgagcacagaaacggacgc
cccgaacaagacaccctactccatctgccatttttgataatcaacactgataaagaaaca
aacgtcgaatgcagtgtctcctcggacaaatccgaattcctgttctctttcgacaaaaaa
ttcgagattcacgacgatttcgaggtgttgaaaagtgagtttcatcttgaattcgcggca
aaaaaaagtgattttcctctagaaatgaagctggcgtgcggattggacactggaaatccg
actgatgaggagctgataaccgcgaaaagcttcttgccaagcttacatcaggcctacgtc
gatgagattgttaccacctacaaagagcgcgaagccgagcgtgaggagaaggagaagcaa
atgctgcttctggctcaacgacagcaacaaatagcacaaatgcagtattacgatccagag
acaggatcgatgggaaatcgctataatcgtcaacttcaagagcatttgatagccgatgag
gatagaaatgccgcagctggaatcatggagcgcgacgaggatctcgtcgtaccaatggaa
cgaaacgcggttcgcggtggtccaatgtacaattccagcggatattcaccgcaaaaaacg
acggcgatgcgcgtcattcaacagcaaccgtcagccactcggagatattatgttcagaag
ggaacaggcgctccaggaccaatggggcgcgaaatgagtccagcgattcgaactatgagt
cgtccctacacgtctacaattccacaacaacggatggctgcaggtggtggtactgtaggt
gcgggcggtggtccagtcaagtactatgtaccccagccaagtggcgtcggaccaggaccc
tcgtcaagctcgatggcgccgagatataaaatccgtacaccaagtcagtcaacacccggc
caacgtgtcacctactcggctggcgccggaggcttaagctccgcccacttacagccagga
caacgtatcgtaacccagcgaattgtccagtctggtgggccacatcctccaagaacggta
gttcgaaaagtgattcggaagattgtggtgaatccgggcggcggtgcgaaacagagtcca
gcgcaacaagtgatacaaaagaagatgatggagcaagaaatgcaagaccggaagcccgat
atgccgatgacgtctgcgcaagcggcggcgatgatccaacacgaaccgccatccgattat
gactatttttga
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