Caenorhabditis briggsae (nematode): CBG_00972
Help
Entry
CBG_00972 CDS
T01054
Symbol
Cbr-ufd-3
Name
(RefSeq) Protein CBR-UFD-3
KO
K14018
phospholipase A-2-activating protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_00972 (Cbr-ufd-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUL
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
PFU
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Beta-prop_WDR41
ASA1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
TRM82_WD
Beta-prop_BBS7
Beta-prop_DCAF12
WD40_RLD
CFAP251_N
Beta-prop_WDR19_1st
UCP031277
Holin_BhlA
DUF1647
Motif
Other DBs
NCBI-GeneID:
8573233
NCBI-ProteinID:
XP_045091696
WormBase:
CBG00972
LinkDB
All DBs
Position
II:complement(<397606..>400491)
Genome browser
AA seq
896 aa
AA seq
DB search
MADSAVVDEAMDTSPPVGIQNIKNYAIGQVLEAHKSDAKSLALTDTGVLISGGRDETVQW
WGPRAGKYSKILSFAQPKNIAVNSIAYADLADGWRLFVGRKDGSIAVYASGNSEPITIFN
EHTQNVCCLHINQKATHMLSGSWDANVMIFPIAELNKPSFTVREVHKCVGHSLSVWALAS
FPENPDTYLTASADKTIRMWHNTNTINVFKGHTDVVRALAVLSNAHFLSAGNDGHIIHWD
VASASVLGKFSTNAHDFIYSMTLSDSHILTTGEDGTLEFWAMDADKNGQLAVRSEEVVQL
PSSATWDAKVLPNSDIAVAGSDGRIYIMSNEPERQAATEIREAFDAEVVAKITQKMDRMQ
EEASDVVTIKVDIDDRPTQLELRYRKGTDPALCAQEFIQDNQLSIHHLDEIISFIKVSVK
QELKLKTVIFQQRIPEARAFDIKSGKKVLVDGEEYDYALSVTLGRGAAEMKMPFNINESP
EFAAQRFVEKNKLPINTIPVLAGMISTEMDKLSRGQSASQAGYEDPFTGPGRYVPGGSSN
NVQSAADPFTGSGRYVPGSSNAGGMDGFSGDPLTGDGGYRAAKENNGKHAVPLSSLPQDK
KKPRGPLVPVPEYMIMGLAGKGDKAIAKLKELNENQDAFRLNSDQINCLEELFLLPSSSN
YSSDLAQSAFDTALQWSVDNLVPVLDFFRIALTHESLNSYFCARDKGRDLVERLIAILVS
DPTDLSLRVMVCRCIANAFAHPAGRKLFAATELSTLAPLVVHQFLSDKPVLQLSAATALA
NWSLALLQQSEKVQELGPKEDLLRAIVDVSVFRGLMEFYLFIFQKIETVSSFGYISEDSL
TRLLQSIVTVMWGDSAVIRLAKNRGLAAIAARLKDAAQGDPCKNIARDIVEMTYAV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcagcagtggttgatgaggctatggacacgtcgccgccggtcggaattcag
aatatcaaaaactacgcgattggacaagttctcgaagcccacaagtcagatgccaagtcc
ctggcgctcaccgataccggagtgctcatatcgggcggtcgagacgagacagtgcagtgg
tggggcccgcgagctggaaaatattcgaaaattttgtcattcgctcaaccgaagaacatc
gctgtcaactcgatagcctacgcggatttggcagatggatggaggcttttcgtgggtcgg
aaagacggatctattgctgtctacgcttctggcaactcggaaccgatcactattttcaat
gagcacacacaaaacgtgtgttgcctgcatataaaccagaaagccacacatatgcttagt
ggatcatgggatgcaaatgtaatgattttcccgattgcagagctaaacaaaccaagtttt
acggtaagagaagttcacaagtgtgttggacacagcctctccgtctgggcgctcgcttcg
ttcccggaaaacccagacacgtatctgaccgccagtgccgataaaaccatcagaatgtgg
cacaacaccaacaccatcaatgtcttcaagggacacacggatgtggttcgagccctggcc
gttctctccaatgctcatttcctctccgctggaaatgatggacacatcattcactgggac
gtcgcatctgcttcagttctcggaaaattcagcaccaacgcccacgactttatatatagt
atgacgctgagtgattcgcatattttgacgactggagaagatggaacgctcgagttttgg
gcgatggatgctgataagaatggacagttggcggtcagatcggaggaagtcgttcagcta
ccctcgtcggccacgtgggatgcaaaagtgcttccgaattcggacattgctgttgctgga
agtgacggaaggatctacatcatgtctaatgagccagaacgccaagcagctacagaaatt
cgagaagcgtttgatgcggaagtcgttgcgaagatcactcagaaaatggatcgtatgcaa
gaggaggcttccgatgttgtcaccatcaaagtggacattgatgatcgaccgactcaattg
gagcttcgctatcgaaaaggaacggatccagcgctgtgcgctcaagagttcattcaggat
aatcaattgtcaattcatcatttggatgagatcatcagttttatcaaggtaagtgttaag
caggaattgaaattgaaaactgtaatttttcagcaaagaatcccagaagcccgcgcattc
gacatcaagtctggcaagaaggttctggtggacggagaggagtacgattacgcgttgagt
gtcactcttggacggggagctgcggaaatgaaaatgccgtttaatatcaacgaaagtccc
gaattcgccgcccagcgatttgtagagaagaacaaattgccaattaacacaatcccggtg
ttagctggaatgattagcacggagatggacaagctgtcgagaggacaaagtgcttcgcaa
gccggttacgaagacccattcactggccctggaagatatgtgccaggaggatcttcgaac
aacgtgcaaagcgccgcggatccattcacaggctctggtcgttatgttccaggaagtagc
aacgctggaggaatggatggattctctggagatccgctgaccggtgatggaggatatcgt
gctgcaaaggagaacaatgggaaacatgctgtgccactttcatcacttccacaggacaaa
aagaagccacgaggaccactggtaccagttcctgaatatatgattatggggcttgcgggt
aaaggagacaaggcgattgcaaagctgaaggaattgaacgagaaccaagatgctttccga
ttgaattccgaccaaatcaactgtcttgaagagctcttccttctcccatcatcctccaac
tactcgtcagatcttgctcaatctgcattcgacactgctcttcagtggagtgtcgataat
ctggtgccagtcctcgacttcttccgaatcgctctcacccatgaatccttgaattcctac
ttctgcgccagagacaaaggacgtgatctagtggagagattgattgcaattctggtctca
gatccaacagatctttctttgagagttatggtctgccgatgcatcgccaacgcattcgcc
catcctgctggtcggaagcttttcgcagcgactgagctttccacgttggctccattggta
gtccaccagtttctcagcgataagccggtgcttcagttgtccgctgccaccgccttggct
aactggtcattggctcttctacaacaatccgagaaggttcaggagttgggaccaaaggag
gatctactgagagctattgtagatgtaagtgtttttagaggactgatggagttttatttg
tttatttttcagaaaatcgaaaccgtcagctcattcggatacatcagtgaggattctctt
acacgtctccttcaatccattgtcaccgtgatgtggggagattctgctgtgattcggctc
gccaagaatcgtggtctcgccgctattgccgctcgtcttaaagatgccgctcaaggagat
ccatgcaaaaacattgcccgtgatatcgtcgaaatgacatatgcggtttaa
DBGET
integrated database retrieval system