Caenorhabditis briggsae (nematode): CBG_01025
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Entry
CBG_01025 CDS
T01054
Name
(RefSeq) Protein CBG01025
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CBG_01025
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_01025
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_01025
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_01025
03041 Spliceosome [BR:
cbr03041
]
CBG_01025
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
CBG_01025
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
CBG_01025
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CBG_01025
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CBG_01025
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CBG_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
T4-Gluco-transf
Motif
Other DBs
NCBI-GeneID:
8573010
NCBI-ProteinID:
XP_045091684
WormBase:
CBG01025
LinkDB
All DBs
Position
II:146983..148110
Genome browser
AA seq
223 aa
AA seq
DB search
MANIPSFIDRLLSVNDTANPSLTHCIKEAEIDDRRYSLSLYNAFQDLFNGLPLCAMISGR
IFCMHGGLSPQLESWKQLAAIKRPFDPPNKSIAMDLLWADPENNMNGWAKNSRGVSYIFG
ADVVKDFTDKMNIDLIARGHQVVQDGYEFFAGKRLVTIFSAPKYCGEFDNNAGVMIVDER
LIISFDILKPAIREVTIRARGTSKNASTRSMLVSSRGPKSKMG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacatccccagctttatcgatcgactcttatcagtcaatgacacggcgaacccc
tctctgacacattgtatcaaagaagcggagatcgacgatagacgatactcgttgagtttg
tacaacgcttttcaggacctcttcaacggtctccccttgtgtgccatgatttctgggcgt
attttctgtatgcacggaggtctgagtcctcaactggagtcgtggaagcagctcgccgcc
atcaagcgtcctttcgatccaccaaacaaatcaatcgccatggatcttctttgggcagat
ccggagaacaatatgaacggatgggcaaagaactctcgaggtgtttcttatatttttggt
gctgatgtcgtcaaggattttacggacaagatgaacattgatttaattgccagaggacat
caggtggttcaagacggctacgagttcttcgctggcaaacgacttgtgacaatcttctcg
gccccaaaatattgtggagaattcgacaacaatgcaggagtgatgattgttgatgagagg
ctcataatctcgtttgacattctgaaacctgccattcgtgaagtgacgattcgagcacgt
ggaacatctaaaaacgcgtcgacaagaagcatgcttgtcagcagtcgaggacccaaatcg
aaaatgggatga
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