Caenorhabditis briggsae (nematode): CBG_01474
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Entry
CBG_01474 CDS
T01054
Symbol
Cbr-smk-1
Name
(RefSeq) Protein CBR-SMK-1
KO
K17491
protein phosphatase 4 regulatory subunit 3
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04212
Longevity regulating pathway - worm
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09150 Organismal Systems
09149 Aging
04212 Longevity regulating pathway - worm
CBG_01474 (Cbr-smk-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_01474 (Cbr-smk-1)
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_01474 (Cbr-smk-1)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-4
Regulatory subunits
CBG_01474 (Cbr-smk-1)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Protein phosphatase 4
CBG_01474 (Cbr-smk-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP4R3
Motif
Other DBs
NCBI-GeneID:
8577307
NCBI-ProteinID:
XP_045091857
LinkDB
All DBs
Position
V:complement(1148497..1154626)
Genome browser
AA seq
1124 aa
AA seq
DB search
MSDTKGVSDDPMENETSSVDGVKEAEEKDKDNTEKMDVDEEPDEQKSASQETMETAEASE
EKREDLEKPVAEVKDDDSSSETKEDEPSEDDPELADAKEDEDSAKDMEQDDPSEENTEKE
EKTAGNKGKAVNGQLKRRNEKSPKRIPKVDGKENKEDEQLTRREHILDHLDFKRDASNRV
KLYVLCDQRIWEDRGTGHVVTHQLTAEDGAPSNAGNTMVLVRLEGKSEPIHITKCILNKQ
IVGKNILESRILMDTVYQKQQETLIVWSETDCMDLALSFQEKSGCEELWQKICEVQGRDP
GDPDATFDDGDDSDIGEMSSSSSRLQLPPIEIGRLSELDAILHMHLASNSAREKMTMAIE
SDNVVTKLCEVFRMCEDIEHTEGLRTFYSIVKNLFMLNRNTVIEMLLDDSNIKDVIGMFE
FDPAYKNPRKHREFVYEKAKFREVLNITSDELRDKIHRLYRAQYIQDACLPSLGLFEENL
LSTLGSHVFFCRVDIVSMLQKDKKAMAELFGQLKSDETEVIRRRDLVLFLKEMICLSTSI
PANGPAATKETFFKVLQLQSMFNNDILDSLEPSFKSPDHETRCVMTDVLRTMVDSNAQTI
RDYLLKQAKNKDRNEDVLLNRMINHLLTDIDVHLTSGSEMILILKTLLDPENMTSVKSER
SEFLHLFYHRCFDTLLKPMLENVSGGVIKKDDYIIANRQSVVLRLLTFCVEHHSFSMRQR
CVSNDMMNKVLVLLKSKHSFLVLSALKLLQRVVTVKDDKYIRYLVKEKVLDPVMECFRKN
GNRYNIVNSAVLHLFDFVKCEDVRPLIKYVVENHMEVIESVNYVKTFKEIKIRYDQHRDR
EETMSIRSEDNLSLASPRSSRRDRNEDQWFDEDEELEVGSMMESIEKDSVSVSPKKEESG
QGRKTGIEPMFPSLLKRKNAFDEDEAPVFGGGSAAVINNAEKKIVIKVGANHNDVLETIL
RKPFSCSSPGPSREDEVTSSQNNKESSPTSTVKVRLYQKLCFMKNSSFQSLVDYDESDSD
EELPSPDAIPSSSTGSPESDKEADAKDGKKIDSPEYNDVSSTSSEEKFDSLPNGAHVTNE
NGGESTVSQEISRKRTSDGCDPNDAKRSRTEDADLAANETASEA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacaaaaggagtctccgatgatccaatggagaatgagacgagctcggttgat
ggtgttaaagaggcagaggagaaagacaaggataataccgaaaaaatggacgtagatgag
gagccagatgagcagaagtcagcgtctcaggaaaccatggaaaccgcggaggctagtgag
gaaaagagagaagacctcgagaagccggtagcagaagtgaaagacgatgattcaagctcc
gaaacgaaggaagatgaaccgtcagaggatgatccggagctcgctgatgctaaagaagac
gaagattcagctaaagacatggaacaggatgatccgagtgaggaaaatactgaaaaagaa
gagaagacagcaggaaacaaaggaaaagcagtcaacggccagctgaaaagaaggaatgaa
aaaagtccaaaaaggattccaaaggtggatggaaaagaaaacaaagaggatgagcagctg
actagaagagaacatattctcgaccatctagatttcaaaagagatgcctcgaatcgggta
aaactctacgtactttgcgatcagagaatttgggaggatcggggcacaggacacgttgtc
actcatcagttaacagcagaagatggcgctccatctaacgccggtaacacgatggttctt
gtacgtttggaaggcaaaagtgagcctatacatatcacgaaatgtattttaaataagcaa
attgtaggtaaaaacatacttgagtcacggattctcatggacactgtatatcagaagcag
caggagaccctcatagtatggtcagaaactgattgcatggatctcgccctgtcgttccaa
gagaaatcgggatgtgaagagctgtggcagaagatctgcgaagtccaagggagagatcct
ggagatccggatgccaccttcgacgacggcgatgacagcgatatcggagagatgtcctcg
tcttctagtcgtttacaactgccgccaatcgaaataggaaggctcagtgagctcgacgcc
attcttcatatgcatttagcctcaaatagtgctcgagagaaaatgacgatggctattgag
agtgacaacgtcgtcaccaagctgtgcgaggttttccgcatgtgcgaagatattgagcac
accgaaggacttcgaacattctactcgattgtcaaaaacttgttcatgctcaatcgaaac
actgttatcgaaatgctcctggatgactccaacattaaagacgttattggaatgtttgaa
ttcgatccagcttataagaatccacgcaagcaccgggaattcgtctacgagaaagccaag
ttccgcgaggttttgaacatcactagtgacgagttgagggacaagattcatcgactctac
cgtgctcaatacattcaggacgcctgtctaccgagcttgggtcttttcgaagagaatctt
ctttctactcttggaagtcatgtgtttttctgtcgggttgacattgtatcaatgttgcaa
aaggacaaaaaggcaatggccgagttgtttgggcagctgaaaagcgatgagacggaagtt
attcgtcgtcgcgacttggttctgttcctgaaggagatgatttgcttaagcaccagcatc
ccagctaacgggcctgctgctacgaaagaaacattcttcaaagtgttgcagctgcaaagt
atgttcaataacgacatactcgattcgctagaaccctcgttcaagtcgccggatcacgag
acgagatgcgttatgactgatgtgctcagaacaatggtcgacagcaatgcgcaaacgatt
cgtgattatctgctcaagcaagccaagaacaaggatagaaacgaggatgtgcttctgaac
agaatgatcaaccatctgctcactgatatcgatgtacatttgacttctggatcagagatg
attttgatcttgaaaaccctcctggaccctgagaacatgacaagtgtgaagtccgagaga
agtgaatttttgcatctcttctaccatcgttgctttgatactctgctgaagccaatgctc
gagaacgtcagtggaggtgtcatcaagaaggacgactacataattgccaaccgacaatca
gtcgttctccgccttctcaccttctgtgtcgaacatcactcattttctatgcgtcagaga
tgtgtatcaaacgatatgatgaacaaagtgctcgtgctcctcaagtcaaaacactctttc
ctcgttctgtctgctctcaaactcctccaacgtgtggtcactgttaaagacgacaaatac
ataagatacctggtcaaggagaaagtcctcgatccagtcatggagtgcttccgcaagaac
ggtaatcgctataacattgtcaactctgccgtgttgcacctgttcgattttgtaaaatgc
gaagacgttcgaccgctcatcaagtatgtcgtcgagaatcatatggaagtgattgagtca
gtcaactacgtgaagacgttcaaagaaatcaaaattcgctacgatcagcatcgtgaccgt
gaggaaacgatgagcattcgttcagaagacaacttgtcgttggcgagccccagaagttct
cgcagagatcgcaatgaagatcaatggttcgatgaagatgaagagttggaagttggatca
atgatggagtccatcgagaaagactcggtatccgtatcacccaagaaggaagagtctgga
caaggaaggaagactggaatcgagccaatgttcccatctctattgaaacgtaaaaatgcg
ttcgatgaagatgaggcacccgtatttggtggtggatcagcagccgttattaataatgca
gagaaaaagattgtaattaaggtaggtgcaaatcacaatgacgttctagaaacaattcta
agaaagcctttcagttgctcatctccaggaccatctagagaagatgaagtgacatcgtct
cagaataacaaggaaagcagtccaacttcaacagtcaaagtaagattatatcaaaagttg
tgttttatgaaaaattcatcatttcagtctctcgtggactatgacgaatccgattctgac
gaggagttgccctcgccagatgccattccatcgtcgtctactggaagtccggaaagcgac
aaggaggctgatgctaaagacggaaagaaaatagattcacctgaatataacgatgtttcg
tccactagcagcgaggagaagttcgactcacttccaaatggagcacatgttactaatgag
aacggtggagagagtactgtgtcacaggagatcagtcgcaagcgaaccagtgatggatgt
gatccgaatgatgcgaagagaagtagaaccgaagatgcagatctggctgccaatgagaca
gcgtctgaagcctaa
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