Caenorhabditis briggsae (nematode): CBG_01669
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Entry
CBG_01669 CDS
T01054
Symbol
Cbr-sars-2
Name
(RefSeq) Protein CBR-SARS-2
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_01669 (Cbr-sars-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_01669 (Cbr-sars-2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_01669 (Cbr-sars-2)
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CBG_01669 (Cbr-sars-2)
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CBG_01669 (Cbr-sars-2)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_01669 (Cbr-sars-2)
Prokaryotic type
CBG_01669 (Cbr-sars-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA-synt_2d
Epsilon_antitox
His_biosynth
Gln_amidase_like
Motif
Other DBs
NCBI-GeneID:
8576111
NCBI-ProteinID:
XP_045091919
WormBase:
CBG01669
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All DBs
Position
IV:complement(10883334..10885066)
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AA seq
468 aa
AA seq
DB search
MRRLYQLALRSRNLNVGLARRFTSTEASTSEEDSTPPTLRPDLNFEFLLNEKNIEAIKEN
ILNRKGVGDIDKVHEKWAVIQKMMNSGEKPNDINEQKYAQLWNELYDEAILIPNMTQDGV
PQGSEENAKKVSEWGDKREDDCLTAEKLVQNWRSLLHPTEASGQRSYVFLGSLASLEKAL
LDYAYERVCALGFRPITVPDLVSGEVTQACGVMQRSEHPIQYTLAGDEAHTKLSGTAEMG
IAAFLRGRTFQEEQLPIRLVSLSRCFRTEISKSASEAKLYRVHEFSKVEMFVVCTPEQSL
AELDYVVEVQKGTFQALGIHCRYQKPFHCHLELCIFRQLEMPSEELGASAAKKFDIEAWM
PGRKLYGEVSSASNCTDFQARRLGIKYKTADGTTKYVHTCNGTALSSTRTLISVLETFQN
VSVSMITSDRCNSLLQDKKGLGELPDPLRKRIKQRGGPLRFQPAKSLA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggttgtatcagctggctctgaggagcagaaacttgaacgtcggattagccaga
cgattcacatcaactgaagcgtcgacttctgaagaagactcaacacctccgactcttcga
cctgatttgaattttgaatttcttttaaatgagaagaatatagaggcaattaaggagaat
attttaaatcggaaaggagtcggagacatcgataaagttcatgaaaaatgggcggtgatt
cagaaaatgatgaattccggagagaaaccgaatgacatcaacgaacagaaatatgcgcaa
ctttggaacgaactctacgatgaagccattctaattccaaatatgacacaggatggtgtg
cctcaaggaagtgaagagaacgcgaagaaagtgtcagaatggggagacaaacgagaggat
gactgtctgactgctgagaaacttgttcaaaattggaggtccttgttacatccaacagag
gcttctggacagagatcatacgtctttctcggttctcttgcgagtctagaaaaagctctg
ctggattatgcctatgagagagtgtgtgcactcggattccgcccaattactgtacctgat
cttgtaagtggagaagtcacacaagcatgtggagtcatgcaaagaagcgaacatccgata
cagtacactctggccggcgatgaggctcatactaaactttctggtaccgctgaaatggga
atcgctgcttttttgagagggagaacgtttcaagaagaacaactcccaattcgattggtc
tctctcagcagatgcttccgcacggaaataagtaaatctgcaagcgaagcaaagttgtat
cgagtacacgaattcagtaaagtcgagatgtttgttgtgtgcactccagagcaaagttta
gctgaattggattatgtggtagaggttcagaagggaacatttcaagcactgggaatacat
tgcaggtatcaaaaaccctttcattgtcatcttgagctatgtattttcagacaacttgaa
atgccttctgaagaacttggcgcatctgctgctaaaaaattcgatatcgaagcatggatg
cctggaaggaaactgtatggagaggtttcttcagccagtaattgcacggattttcaagca
agaagacttggtatcaaatacaagactgctgacggcacaaccaaatatgtccacacttgc
aacggaacagccctttcttcaacaagaacacttatatcagttcttgaaacgtttcaaaat
gttagtgtctcaatgattacaagtgatcgctgcaattctttattacaggacaaaaaagga
cttggagagcttccagatccccttcggaagagaattaagcaacgtggcggcccacttcgt
ttccagccggcaaaatctctcgcctaa
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