KEGG   Caenorhabditis briggsae (nematode): CBG_01741
Entry
CBG_01741         CDS       T01054                                 
Symbol
Cbr-hoe-1
Name
(RefSeq) Protein CBR-HOE-1
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_01741 (Cbr-hoe-1)
Enzymes [BR:cbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     CBG_01741 (Cbr-hoe-1)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CBG_01741 (Cbr-hoe-1)
 Prokaryotic type
    CBG_01741 (Cbr-hoe-1)
SSDB
Motif
Pfam: Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B Lactamase_B_4
Other DBs
NCBI-GeneID: 8576168
NCBI-ProteinID: XP_045091897
WormBase: CBG01741
LinkDB
Position
IV:<10615822..>10618698
AA seq 832 aa
MRRAALKSFANRILIPRNSVSTTARTFNEDLLESIKERIARNRRILQKHSSSHLKAREVN
ASISNLRQSMASVQKKQKAAHEPPSNSIVNIPSQVSIEVLGNGTGLLHACFILRTPLKTY
MFNCPENACRFLWQLRVRSSSVVDLFLTSASWDNIAGISSILLSKEANAMPTRLHGAMNI
KHFLECIRPFQDSDYGSCKYPSQVEERPYTMGNYEDAGLKVTYIPLSPPLDMTSRTSNKN
KVNNVDVAFLIEMKEAARRIDVTKLLELKVPKGPLIGKLKSGEAVTLPDGRTIQPDQVFS
SHKVEGEKPFLLVAECTTEQHVQSLLDSSSMQQFFNKGKQLDYMVHLSRESVINTESYKK
LMEKLSDAGTSHLLINEVNPVIPAVESVYKHTRLLRTISPSLFPPLHPINWNGIITQNSE
LAEKQDQFIRVAPLQRYWMRRGNSQNEEPIINNLLASDPEISVKAKELIAEYRKLEDSVE
NNCEFPKLTFFGTSSAVPSKYRNVTGYLVEGSDESAILLDVGEGTYGQMKAIFGEVGCKK
LLTNLHCVLITHAHQDHMNGLYTIVDRRKEAFESLGIPYRPLVLVCNRNVLKPLKTYSIC
FENIQSLLEIVDISRHPLTPPSSPNGPPGKRPKLPSPHLPPCRDILGDMPSIFDKKKWNL
DELKAVQVHHTRMANGFVMRVAGKRIVFSGDTKPCDLLVEEGQGADILVHESTFEDGHEN
DAMRKRHSTMGQAVDVGKRMNAKHIILTHFSARYPKVPVLPQYLDTDNIGIAMDMLRVRF
DHLSLVPKLLPIYREVFVSELFELAIKKEQRNLKDKESLEKNEQRKAVKQSS
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgcgacgggctgcactaaaatcatttgcaaatcggattctaattccccgtaactccgtc
tccacaaccgccagaacatttaacgaagacttgttagaaagcataaaagaaagaatcgcc
aggaatcgccgcatccttcagaagcattcttcctctcatttgaaggctcgagaagtcaac
gctagcatttcaaacctgcgtcaatccatggcttctgtacaaaagaaacaaaaagctgct
catgaaccaccgtctaattcaatcgtcaatattcccagtcaagtttcaattgaggtcctg
ggaaatggaacaggattgctccatgcgtgtttcattcttcgcacaccactaaaaacttat
atgttcaactgtccagaaaatgcatgcaggttcttatggcaactccgagtccgcagttca
agtgtggtcgatttatttctaacttcagcaagttgggataatatcgctggaatttcctcg
attctcctttccaaagaggcaaatgccatgcccactcgtcttcatggagccatgaatatc
aagcattttctagaatgtattcgtccatttcaagattcggactatggaagctgcaagtac
ccatctcaagtagaagaacgaccgtatacaatgggaaattacgaggatgctggcttgaaa
gttacatatattccactcagcccgccgttagatatgaccagcagaacgagcaacaagaat
aaagtgaacaatgtggatgtggcttttttgattgagatgaaagaagctgcacggaggatt
gatgtgacaaagttactcgaactaaaagtgccgaaaggaccattaattgggaaactgaaa
tcaggagaagctgttactcttcctgatggaagaactattcaaccggatcaagtcttctca
tcccacaaagttgaaggagagaagccatttctattggtagcagagtgcacaacagaacaa
catgttcaatctctgcttgattcttcttctatgcaacaattcttcaataaagggaaacag
ctggactacatggttcatctcagtcgtgagtcggtgattaatacggaatcttacaaaaag
ctaatggaaaaactgagcgatgctggtacatctcatttgctaatcaatgaagttaatcca
gtgatacctgctgtggaaagtgtatacaagcatacgcgtctcctgcgaacaatttctcct
tctcttttcccaccgcttcatccaatcaactggaatggcataatcactcaaaacagtgaa
cttgcggaaaagcaggaccaattcattcgggttgctccattgcaaaggtattggatgaga
agaggaaactcgcaaaatgaggaaccaattatcaacaatctattagcttctgatccggaa
atttctgttaaagcaaaagagctgattgcggagtatagaaaattggaagacagtgttgaa
aacaactgcgaattcccaaagttgacgttcttcggtacatcttctgcagttccatcaaaa
tatcgaaatgtgacgggctatttggttgaaggttctgacgaaagtgcgatacttctagat
gttggagaaggaacatatggacaaatgaaagcaatctttggagaagttggctgcaaaaaa
ttgctcacgaatcttcactgtgttctaatcacacatgctcatcaggaccatatgaatggt
ctctacacaattgtggatcgtcgaaaagaggcatttgaatcactaggaataccgtaccga
cctcttgttcttgtgtgcaatagaaatgtgctgaaacccctcaaaacatattccatctgt
tttgaaaacatccaaagcctactggaaattgtggatatttctagacatccccttacacca
ccttccagtcccaacggtccacccggaaaaaggccaaaacttccgagcccgcatttgcca
ccgtgccgggacattctgggtgatatgccgagcatttttgacaaaaagaaatggaatctt
gacgagttgaaagctgtacaagtacatcacactagaatggcaaatggatttgtgatgcgt
gttgccggaaaaagaattgtgttctcgggagataccaaaccttgtgatttattagttgag
gaaggacaaggagcagacattctggttcacgagtctacatttgaagatgggcatgagaat
gatgcgatgcgtaaacggcattctacaatgggtcaggctgtggatgttggaaaacgaatg
aatgcgaagcacattatcctaacacatttcagtgcgagatatccaaaagttccagttctc
ccgcagtatctcgacacagataatatcggaattgcaatggatatgctacgagtcagattt
gaccatttgtcactagtaccaaaattactccctatttatagggaagtcttcgtatctgag
cttttcgagttagccatcaaaaaggagcagcgaaatctcaaagataaggaatcactcgag
aaaaatgagcagagaaaagcggtgaagcagagcagttga

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