KEGG   Caenorhabditis briggsae (nematode): CBG_01808
Entry
CBG_01808         CDS       T01054                                 
Name
(RefSeq) Protein CBG01808
  KO
K14791  periodic tryptophan protein 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbr03009]
    CBG_01808
Ribosome biogenesis [BR:cbr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CBG_01808
  Pre-60S particles
   Other pre-60S particles
    CBG_01808
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 8576233
NCBI-ProteinID: XP_002634238
WormBase: CBG01808
UniProt: A8WQS1 A0AAE9EU39
LinkDB
Position
IV:complement(<10416818..>10418379)
AA seq 463 aa
MEGVLMVSDLSWIQRGVAKEIPDKIKLNDEELKKLIEGALPESTDNDTDGDEEEDEDKKE
GIRGRDVEMKDEESDFEKKYMQGYNEKEEGEEEGEDGMKGIAMYSTNKDDPYVTEQVDSD
EEEEKEEIMVRKDDNMVAVAKIDKGDYTLECYVYNEADSDWYCHHDYILDAPPLCIEPVQ
HDPGNEETGKGNLIAVGTMNSEIHIWDLDIMNTATPFLTLGKKEKKSKGGRKKRDGSAQG
HTDAVISLAWNKVTPHVLASGGADKTVVLWDLDEAKPAQIIPDRGGEVQTIRWHPNESTF
LLLGTMKGHVQVVDCRETNGTASATWKFDGQIEKVIWNHFNPYTVFVSSDDGRLRHLDLR
KPGECLWEGVAHDGPIGGLTLSAITRGLLVTVGEDEMMNVWKVEDTNGGIEKVHSEKLTI
GELHCAQFNPDVAAVLSVGGTTADLIRVIDLTKYEPVVKAFSE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggagggtgttttgatggtatcggatctctcttggattcaacgaggagtggcaaaagaa
atccctgataaaatcaagttgaacgatgaagaactcaagaaattgattgagggagccctt
cctgaatctacagataacgacactgacggcgacgaagaagaagacgaagataagaaagaa
ggaatccgtggaagagatgtagaaatgaaagatgaggagtcagatttcgagaaaaaatac
atgcaaggatacaatgaaaaggaagagggtgaagaggagggagaagacggaatgaaaggt
attgctatgtattcgacgaacaaagacgatccttatgtaacggagcaagtagattctgat
gaggaagaagagaaagaagaaatcatggttcgcaaagatgataatatggttgctgtagcc
aaaattgacaaaggagattacactttggaatgctacgtgtacaacgaggcagacagtgat
tggtactgtcatcacgactatattctcgacgctcccccgctttgtattgaacctgtgcaa
cacgatccaggaaatgaagaaactgggaaaggaaatttgatcgccgtcggaaccatgaac
tcggaaattcacatttgggatctcgacatcatgaacactgccactccatttttgactctg
ggaaaaaaagaaaaaaaatcaaaaggtggaagaaagaagagagatggaagtgcacaagga
cacacggatgcagtaatttctctcgcctggaacaaagtcactccacacgttcttgctagc
ggtggagccgacaagactgtagttctttgggatttggatgaggccaaacctgcacaaatc
atccccgaccgtggtggagaagttcaaacaatcagatggcatccaaatgagtcgacattc
ttgttgctgggaaccatgaaaggtcatgttcaagttgtcgattgccgcgaaacgaacgga
accgcttcagcaacgtggaaatttgatggacaaattgagaaagttatctggaatcatttc
aatccatacacagtgttcgtttcttcggatgatggaagattgcgtcatttggacttgaga
aaaccaggagaatgcctttgggaaggtgtcgctcatgatggaccaattggtggtctcaca
ttatcagcaatcacaagaggacttttggtgactgttggagaagatgagatgatgaatgtc
tggaaagttgaagacacaaatggcggaatcgagaaagttcattcggagaagctgaccatc
ggagaattgcactgtgcccagttcaatcctgacgttgccgctgttctctcagtcggtgga
accactgctgatctgatcagagtcattgatttgaccaagtatgagccggtagtcaaagct
ttctccgaataa

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