Caenorhabditis briggsae (nematode): CBG_02201
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Entry
CBG_02201 CDS
T01054
Symbol
Cbr-blmp-1
Name
(RefSeq) Protein CBR-BLMP-1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_02201 (Cbr-blmp-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
CBG_02201 (Cbr-blmp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
SET
BolA
Scramblase
zf-C2HE
NdhM
DUF4428
Motif
Other DBs
NCBI-GeneID:
8581750
NCBI-ProteinID:
XP_045092067
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Position
I:complement(8205057..8208780)
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AA seq
799 aa
AA seq
DB search
MGQGCGDEDVPPAPFSSAHSPAHSPLSVGVFSTSSATSSSSTPPPSTSPSASGVTTGVRS
TENDWKQAADENLAELCIFHVPDKAITLPNPKRAECTLPMNLILKSSKNRKKSSIWSSDQ
IPRGVRFGPLVGEIRLVDVESALVFPAEASMAGGTTAQEEVPFDETPEEWKVFSPSGGRL
TKTISVKDDGKSNWMKYVVAAEDESNQNLVAAQIGNDIYFYTVKKIESNTELSFWFSRDY
ARKLNYSTTPSVRTRATSQQAPILLVPSIPSIPSAAPISSSTAIASLAETIIAIDYSVKK
LVEPADVPSTDASSTSDNDEEMVDVEEKESCTKPVAEVSRPNVIQNPVVRPVPTRLTSFS
APIRPAPLDPLAMYKDYLRKTIQWTKLTETSIFVPPVVQTAATITATGGRSGQPIDVQPV
LAATAGAHFGNYAAIYGSQDFQNELKPLFTTATPAFGGGGGMGGGFGMGGSGHGSSFHQL
PFVNHSAASHNDSSFNGVPNYVQQQENGKTRYACKDCNKTFGQLSNLKVHVRTHTGERPF
KCEICTKEFTQLAHLQKHHLVHTGERPHRCDICDKRFSSTSNLKTHLRLHNGQKPYTCDV
CDAKFTQYVHLRLHKRLHANERPYSCGTCGKKYISPSGLRTHWKTTTCKEEDTKDMLMWK
KDDLMEIKGEIDEGSPSNYMDIFENPLKYNISNPSLLGQGPSGMQEQQPPPPTPQQQQHM
MYGNGMGHMGQPQHLQGPPQHFQMDHNGMQNGGHPHQHQLLQPQSVQPSHNPHDSVHQPL
RLPDLKPSLLPTLGLPHYQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaggatgtggggatgaagacgtccccccggcaccattctcttctgctcactct
ccagctcactccccattatcagttggagtcttttctacttcatctgccacgtcatcatct
tcaacacctcctccgtcaacgtctcccagtgcatctggagttacaacaggtgtccgatcg
acagaaaatgattggaaacaggcagcagatgagaatctggccgagttgtgtatatttcat
gtcccggataaagctattaccttgccgaacccgaagcgagccgagtgtacgttgcctatg
aatttgattctgaaatcttcaaaaaaccgtaaaaaatcatcgatttggtcatctgatcaa
attccacgaggtgttcgattcggtcctcttgttggagaaattcgattggttgacgtcgaa
tcagcactcgtgtttcctgctgaagcttcaatggctggtggaacgacggcacaagaagag
gttccatttgatgaaactccggaagaatggaaagttttctcgccttctggaggtcggcta
acaaaaacaataagtgtgaaggacgatggaaaatcaaattggatgaagtatgtggtggca
gcagaagatgaaagtaatcagaatctggtcgctgctcaaattggaaatgatatttatttc
tacaccgtcaaaaagattgaatcgaatacagaactgtcattttggttcagcagagattat
gccagaaaattgaattattcaacaactccgtccgtgaggacaagagccacctctcaacaa
gcaccaatccttctggttccatcaattccatcgattccatctgcagcaccaatttcgtct
tcaactgcaatcgcaagcctagcagagacaataattgccatcgattattccgtaaagaaa
cttgtcgaacctgcagatgttccatcaactgatgcctcgtcaaccagtgataatgatgag
gaaatggtcgatgtggaagagaaagagagttgcacaaagccagttgcagaagtctcaagg
cctaatgttatccaaaatccagtagtacgacctgttcctacaagattaacaagcttctca
gcacctatacggcctgctccgttggatcctttggcaatgtataaagattatctgaggaaa
acaattcagtggacaaagctcaccgaaacgtctatatttgtccctccagtggttcaaaca
gctgctacgataactgcgacgggcggaagatccggtcagccaattgacgtacagccggta
ctcgcagccactgctggagctcatttcggaaattacgccgccatttatggaagtcaagat
ttccaaaacgaactgaagccattattcacgactgcaacacccgcatttggcggtggtgga
ggcatgggaggaggattcggaatgggtggaagtggacatggatcgtctttccaccaactt
ccattcgtgaatcattcagctgcctcacacaatgattcgtcgtttaatggggttccaaac
tacgtccaacagcaagagaatggaaaaaccagatacgcttgcaaagactgtaataaaaca
tttggacaactctcaaacttaaaggttcatgtcagaacacacacaggagaacgacccttc
aaatgtgagatctgcacaaaagagttcacccagcttgctcatcttcaaaagcatcatcta
gtacacactggagaacgacctcatcgttgtgatatctgtgataagagattttcgtctaca
tcaaatttgaaaactcatttacgccttcataacggacaaaaaccgtatacttgcgacgtt
tgcgatgccaagttcactcaatacgttcatctgagacttcacaaaagattgcatgcaaat
gaaagaccgtacagctgtggaacctgtggaaagaagtacatttctccaagtggattgaga
actcattggaagacaaccacgtgtaaggaggaggatacaaaagacatgttgatgtggaag
aaggatgatttgatggagattaagggagaaattgatgaaggatctccgtcaaactacatg
gatatttttgaaaatccattgaagtataacatttccaatccatctcttctcggtcaagga
ccaagtggaatgcaagagcaacagcctccaccaccgactccacagcaacaacaacacatg
atgtatggaaatggaatgggacatatgggacagccacaacaccttcaagggccacctcaa
cacttccaaatggatcataatggaatgcaaaatggaggacatccacaccaacatcaactt
cttcagccacaatctgtgcagccatcccataatccccatgatagtgttcatcaacctctt
agacttcctgatctgaaaccatctcttctcccaactctcggtctaccacattatcagtga
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