Caenorhabditis briggsae (nematode): CBG_02230
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Entry
CBG_02230 CDS
T01054
Symbol
Cbr-che-13
Name
(RefSeq) Protein CBR-CHE-13
KO
K04638
intraflagellar transport protein 57
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbr03037
]
CBG_02230 (Cbr-che-13)
Cilium and associated proteins [BR:
cbr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
CBG_02230 (Cbr-che-13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
AAA_13
DUF1664
ATG17_like
TraC_F_IV
TBCC_N
ABC_tran_CTD
COG5_N
WXG100
Flg_hook
WEMBL
Costars
IMD
PHM7_cyt
TPR_MLP1_2
CT398_CC
FapA
Rhabdo_M2
PI3K_P85_iSH2
SctB2
DUF16
Motif
Other DBs
NCBI-GeneID:
8581776
NCBI-ProteinID:
XP_002639782
WormBase:
CBG02230
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All DBs
Position
I:complement(8134748..8136003)
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AA seq
307 aa
AA seq
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MERKNALNVRKISFRQGVPVDFTAAKLKSGAGENVISILSTLADAALVQIGFQWQKMIPP
KEEDEDTAVDEQDDDDDDVAEEPTTFLDDDDDDNVIEIDLKAQGLVTESKNPLQSVLQST
TDSISWKQEVERVAPQLKITLRQDAKDWRLHLEQMNSMHKTVEQKIGNVGPFLDSMSKDI
GKTLERISVREKSLNTQLSSMMSKFKRATDTRAELREKYKAASVGVSSRTETLDRISDDI
EQLKQQIEEQGAKSSDGAPLVKIKQAVSKLEEALQTMNVQIGALEQSILNTYLRDHFNFS
ANLLNIV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaaaatgccctcaatgttcggaagatttcattcagacaaggtgttccagtt
gacttcacagctgcaaagctaaaatctggagccggggaaaacgtgatttcaattttaagt
actcttgctgatgcggctctggttcaaattgggttccagtggcaaaaaatgattcctcca
aaagaagaagacgaagatacagcggttgatgagcaggacgatgacgatgatgacgtggca
gaagagccgacaacttttcttgatgatgacgatgatgataatgtcatcgaaattgattta
aaggcgcagggattggttacagaatcgaagaatcctctccaaagtgttcttcaaagcacc
acagattcgatttcctggaaacaagaagtggagagagttgctccacaattaaagattaca
ttgagacaagatgcaaaagattggcgtcttcatctggaacaaatgaactcaatgcacaaa
acagttgaacaaaaaattggaaatgttggaccctttttggatagtatgtcaaaagacatt
ggaaagactttggaaagaatttcagttagagaaaagtctctgaatactcagttgtctagt
atgatgagcaagttcaaaagagccactgatacaagagcagaattgagggaaaagtataaa
gcagcatcggttggcgtgagttctcgaactgaaacccttgatcggataagtgatgatatt
gaacaattgaaacagcaaatcgaggaacaaggagcaaaatccagtgatggagctccgttg
gtgaagataaagcaagcagtgagcaaattggaagaagcgttgcagacaatgaatgtgcag
ataggagcattggaacaatcgattctgaatacttatctcagagatcacttcaacttcagt
gcaaatcttctgaacattgtctga
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