KEGG   Caenorhabditis briggsae (nematode): CBG_02242
Entry
CBG_02242         CDS       T01054                                 
Name
(RefSeq) Protein CBG02242
  KO
K17936  sorting nexin-27
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_02242
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cbr04990]
    CBG_02242
Membrane trafficking [BR:cbr04131]
 Protein recycling
  Others
   Others
    CBG_02242
Domain-containing proteins not elsewhere classified [BR:cbr04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   CBG_02242
SSDB
Motif
Pfam: PX PDZ PDZ_6 PDZ_2 SNX17-31_F2_FERM
Other DBs
NCBI-GeneID: 8581786
NCBI-ProteinID: XP_002639792
WormBase: CBG02242
UniProt: A8WS72 A0AAE9DUV5
LinkDB
Position
I:complement(8092066..8095477)
AA seq 584 aa
MMQAYDYDSDESPTTSDEHINSRNSSRSDTASSSSTPPILFNPRPHVVKIVKSDTGFGFN
VKGQVSEGGQLRSLNGELYAPLQHVSAVLNRGAADTAGLRKGDRILEVNGLNVEGAAHRN
VVDLIKNGGNELTMIVVSVEDPDMDRFDYGEESSMAYGHDYTENRSLPVTIPSYSNVNDA
LERYTVFNIHMAGRQLGSRRYSEFVELHSALKRHFYDYSFPRLPGKRIFRLNEQELDQRR
RGLEQYLEKICTVRVIAESDLVQKFLMECDPMCEVDIRLMLPNGTAMSVRIRRSISASLF
FTTAQKRLQLSREGAAACSIFELLDNSFERKVNESESVHELYTHNYSSASSSCLLFRKFI
FDIDRERALCRRDMTFRQICFFQAIGDLHSGRVVTTRKSYQLAAIQNEENMDEFLEMARN
LEGYNQVTFPPSVCILRKRKQTVIMVVRYANLFLKCPEDGNSMEIEWDRIQDFRVCDDGT
AFSFDYLRERNGNEEETDREANRKNTKYVKLETGFAEYMADCFAQINTERQSGAEWKKDR
SRTTVTRELCPSEDPSESRETPPPTTHKIQFEKRILEQHRDCID
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgatgcaagcatatgattacgactcggatgagtcgccgacgacgtcagatgagcacatt
aattccagaaattcctctcgttcagacactgcatcatcctcatcgacgcctccaatcctc
ttcaatcccaggccacacgtcgttaaaatagtgaaatcagacactggattcggtttcaat
gtcaaaggacaagtgagtgaaggaggacaattaagaagtctaaacggcgagttgtatgct
ccactacaacatgtcagtgctgtgttaaatcgaggagcagcagacacggcgggacttcga
aaaggggatcggattctagaagtgaatggattaaacgtggaaggagcagcacacaggaat
gttgtggatctgataaaaaacggtggaaatgaactgacaatgattgtggtttctgtagaa
gatccagacatggatagattcgattacggtgaagagagttcaatggcatatggacatgat
tatacggaaaataggtcacttccagttacaattccatcttatagtaacgtcaatgatgca
ttggaaagatatacggtgttcaatattcatatggcaggtcgtcaacttggttctcgtaga
tactctgagtttgttgaacttcattcggcactcaagagacacttttatgactattcgttt
cctcgtcttcctggaaaacgaattttccgtctgaacgaacaggagttggaccagagaaga
agaggacttgagcagtatttggagaagatttgtacggttcgagtcattgcggaatccgat
ttggttcagaaatttttgatggagtgtgatccaatgtgtgaagtggatattcgtttgatg
cttccaaacggaacagcaatgtcagttcgcatcagaagaagtatttcggcttctctcttc
ttcactaccgctcaaaaaagattgcaattaagtagggaaggagctgctgcatgttccatt
tttgaacttttagataactcttttgagcgaaaagtaaacgagagtgaaagcgtacacgaa
ctctacacccacaactactcatctgcttcctcgtcttgtcttcttttccgaaaattcata
tttgatattgatagagaacgagctctctgtcgacgggatatgacattcagacaaatttgt
ttcttccaagcaatcggtgatttgcacagtggaagagttgttacaacgagaaagagttat
cagttggcagctatccaaaacgaagaaaatatggacgaattcttggaaatggcgagaaat
ctcgaaggatataatcaggtcacatttccaccgagtgtctgtattttgagaaaacggaaa
cagacagtcatcatggttgttagatatgcaaatttgtttttgaaatgtcccgaagacgga
aactcaatggaaatcgaatgggatcgtattcaagacttcagagtttgtgatgatggaact
gcattttcatttgattatttgagagaaagaaatgggaatgaagaggaaactgacagagaa
gcaaacagaaaaaatacgaaatatgtgaaattggaaactggattcgctgaatacatggct
gactgtttcgctcaaataaacaccgaacgtcaatctggcgctgaatggaaaaaggatcga
agcagaactacagtaaccagagaactatgcccatcagaagatccatcagaatctagagaa
acgcctccgccgactacacataagattcaattcgaaaaacggattctagaacaacatcga
gattgtattgattga

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