Caenorhabditis briggsae (nematode): CBG_02387
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Entry
CBG_02387 CDS
T01054
Symbol
Cbr-mog-5
Name
(RefSeq) Protein CBR-MOG-5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_02387 (Cbr-mog-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_02387 (Cbr-mog-5)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CBG_02387 (Cbr-mog-5)
Spliceosome [BR:
cbr03041
]
Complex C
Other components
Step II factors
CBG_02387 (Cbr-mog-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
PhoH
GIPC1_GH2
OB_RRP5_4th
AAA_30
AAA_19
nSTAND3
Flavi_DEAD
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
8572222
NCBI-ProteinID:
XP_045092318
WormBase:
CBG02387
LinkDB
All DBs
Position
II:complement(10312416..10316429)
Genome browser
AA seq
1220 aa
AA seq
DB search
MDQLEHLSLVSKVLGELENHFGVADKDVAEFVIQMAQENSTFDKFKKELEKQGLADQFDD
SLTATILRIVQHMTASKKKSKKAGDSKEDVKDSHKITLISDAKEEIKARLPALAMANITI
EKEDSGNDLMAQLEMMEGKYEKEKNRDKGTSEKRNRSRSQSTSRDRKRRRSSSRDRDRGH
RRRSRSREHRRDRDRRDRDRSREDRRRGDRDRRDGDRDRDRRDRREDGRSSRKLEVAEVG
KIYDGRVNSIQSFGAFITLEGFRQKQEGLVHISQIKNERVQSVADVLKRGQAVKVKVNKI
ENGKTSFTMKEVDQQTGEDLNPKETDLDPDAIGVRPRTPPAHTSSWMNPESSSSAGPSTS
MGGGKTRVRISTPERWELRQMQGAGVLTATDMPDFDEEMGVLKNFDGKTKIYIQYLKIFF
LDESDGEDIEIELVEEEPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKE
TKIQAQRERDMDNQKGFSSNARILDPMSGNQASAWTADESKDRNNKMKEMPEWLKHVTAG
GKATYGKRTNLSMIEQRESLPIFALKKKLIEAIIDNQILVVVGETGSGKTTQMTQYAIEA
GLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGSDVGYTIRFEDCTSQDTVIKYMTDGM
LLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKF
SEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDILVFLTGQEE
IDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFEPAPAGKRKVVIATNIAETS
LTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTE
RAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLS
ALDGDGLLTKLGRRMAEFPLEPSLAKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQ
DHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGI
MDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQHQ
PEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDKY
ADPNAWRITRVKKRIYNPNK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacttgagcacctctccctcgtgagcaaagttctcggggaacttgaaaaccat
ttcggagttgctgacaaagatgtcgccgagtttgtaattcaaatggcacaggaaaattct
acctttgataaattcaaaaaggagcttgaaaagcaaggactagcagatcagttcgatgat
tcgctcacagctactatacttcgtattgttcaacacatgacagcttctaagaagaaaagc
aaaaaagccggggattccaaagaggacgttaaagattctcataaaatcacgctgatttcg
gatgcgaaagaagaaattaaagcaagactacctgctttggctatggcgaacataacaata
gaaaaagaagatagtgggaacgatttgatggcacaattggaaatgatggaaggaaaatat
gagaaagagaagaatcgtgacaaaggtacatcagagaagcggaatagatcgagaagtcag
tctacgagccgtgatcgtaaacgaagaaggagtagtagccgggatcgagaccgaggtcat
cgacgacgaagcagaagcagggaacatagaagggatcgcgatagaagagacagagataga
agccgagaagatcgacgaagaggtgatagagacagacgagacggggatagagacagggat
cgtcgtgacagaagagaagatggaagaagctccagaaagctagaagtagcagaagtcggt
aaaatttacgatggacgagtcaacagtattcagtcgttcggagccttcattacactcgaa
ggattccgtcagaagcaggaaggactggtccatatctcacagataaagaacgaacgtgtc
caatcggttgctgatgttctgaaaagaggccaggctgtgaaagtgaaagtgaacaaaatt
gaaaacggtaaaacatcgttcacgatgaaagaagtagatcagcaaactggagaagatctc
aatccgaaagagactgatttggatccggatgccatcggtgtaagaccacgaactccgcca
gctcatacgtcttcttggatgaatccagaatcttcttcaagtgcaggaccatccacttca
atgggaggtggaaaaacaagagtaagaatttccacaccggaaagatgggagttacggcaa
atgcaaggagcgggagtactaacagctacagacatgccagactttgacgaagaaatggga
gtgctgaaaaatttcgatggtaagacgaaaatttatattcaatatttaaaaatatttttt
ttagatgaaagcgatggtgaagacatcgaaatcgagcttgtcgaagaagaaccggacttt
ttgcgtggctacggaaaaggaggcgctgagatagaaccagttaaagttgtcaaaaatcca
gatggatcgctggctcaggcggcgttgatgcaaggagcgttgtcgaaagaacgaaaagaa
accaagattcaagcacaacgagaaagagatatggacaatcagaagggattcagttcaaat
gctcgtattctggatccaatgtctgggaatcaggcatccgcctggactgctgacgaatcg
aaagatcgaaacaacaagatgaaagagatgcctgaatggttgaagcatgttactgctggt
ggaaaagctacatatggaaagagaacgaatttgagtatgattgagcagagagaaagtcta
ccaatctttgctctgaaaaaaaagttgattgaagcaattattgacaaccaaattctcgtc
gttgttggagaaactggttccggaaaaacgactcagatgacgcagtacgctatcgaagca
ggtctggggagacgtgggaaaatcggatgcacacaaccacgtcgtgtagctgcaatgtct
gtggcaaagcgtgtggcagaagagtacggatgcaaacttggatcagatgtgggttacact
attcgtttcgaagattgcaccagtcaagacacagttatcaaatacatgacggacggaatg
ttgctcagagaatgtcttatcgatccagatctatcaggatattcattgattatgcttgac
gaagctcacgaacgtacaattcacactgatgttctgtttggtctgctgaaagctgctgct
agaaaacgtccggagctaaaactgattatcactagtgctactctagattctgtgaaattc
tccgagtacttcttggaagcacccattttcactattcctggaagaactttccctgttgaa
atcttgtatacaagagaaccagagtcagactatctcgaagccgcccatatcactgtgatg
cagattcatctcaccgaaccgcctggtgacattttagtgtttttgactggtcaagaagaa
atcgatacttcctgtgaagtgttgtacgaacggatgaagtcaatgggaccggatgttcct
gaactgattattcttccagtttacggagctcttcctagtgaaatgcaaacacgaatcttt
gaaccggctccagcaggaaaacgtaaagtggtcattgcaaccaacatcgccgaaacatca
cttaccatcgacggtatcttttacgtcgttgatcctggatttgtgaaacagaagatttat
aatccaaagagtggtatggattcactggttgtaacaccgatttctcaagctgctgccaaa
caacgatcaggtcgtgccggacgtaccggaccaggaaaatgctaccgtctttataccgag
agagcgttccgtgatgaaatgctgccgactccagttcctgaaattcagcgaacaaatctt
gcttcaacgcttctgcaactcaaagcaatgggaatcaataatctgattgattttgatttc
atggatgctccgccacttgattcaatgattaccgctctcaacactctgcacacactttct
gcacttgatggtgatggtcttctaactaaacttggacgtcgaatggccgagttccccttg
gaaccatctcttgccaagttgctcattatgtccgtcgatctgggatgctcggaagaagtt
ctcacaattgttgccatgctcaacgttcagaacatcttctatcgaccgaaggaaaaacaa
gatcatgctgatcagaaaaaggcaaagttccatcaacctgaaggagatcatctgaccttg
ctggctgtttacaattcttggaaaaatcatcacttctctcaaccgtggtgttttgagaac
tttattcaagtgagaagtatgaagagagctcaggacattcgaaaacagttgctcggaatc
atggatcgtcacaaactgttaatggtcagttgtggtagagatgtgtcacgagttcagaag
gccatttgttctggattcttccggaatgcggccaaacgtgatccgcaagaaggataccga
acgttgacagacggacaaaatgtctacattcatccatcgtcggcgtgcttccaacatcaa
ccggaatgggttgtctatcacgagctggtcatgacaacgaaagaatatatgagagaggtg
actgcaatcgatccaaaatggcttgtagagtttgcaccatctttcttcaaaatcggcgat
tctacgaagctctcaacattcaagcggaaccagaaaatcgatccgttgttcgacaagtat
gcggatccgaatgcctggcgtatcactcgagtcaaaaagcgaatatacaaccccaacaaa
taa
DBGET
integrated database retrieval system
