Caenorhabditis briggsae (nematode): CBG_02547
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Entry
CBG_02547 CDS
T01054
Symbol
Cbr-casy-1
Name
(RefSeq) Protein CBR-CASY-1
KO
K22659
calsyntenin 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbr04515
]
CBG_02547 (Cbr-casy-1)
Cell adhesion molecules [BR:
cbr04515
]
Cadherins
Cadherin related
CBG_02547 (Cbr-casy-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
8572355
NCBI-ProteinID:
XP_002630839
WormBase:
CBG02547
UniProt:
A0AAE9E9N4
A8WU25
LinkDB
All DBs
Position
II:<9752637..>9762538
Genome browser
AA seq
983 aa
AA seq
DB search
MRTAYLLFVGALLGVSYAKHHHAARAPIINLQGAEELVAVVREDENIISTVPDFAILSET
GPVCNYILTSQNNENVPFDIQVVDKYTGAAVLRVKDAAVLDCKKPEYNLQVQAVKCDNDN
VKSEGVSLKIRVKDTNNHAPEIENPWYTFHVEEGKVIDEVGVLKASDKDCGHPNGEICEY
EITNGLKELPFAINNQGVLRTTQPLNFTQSKSYILTVVAIDCAMRKSKSSLVTVHVDEKC
VQGITAMNERVNYAAGTGSKLLLPDVALEFCEKKSVCEPKSIQSIIELRAGHVTQGCARD
TVYDNQTIQSCGLSTATVKLLNEEALTSSAENHILADQGIEFDGARGLTVDDNVHQGLIS
DHFTLSFSMKHAAGTKDEQSNKQNILCESDDFNMNRHHFSVYIRHCKLEVVLRRESGATA
DFRAAEWRWSMPEVCDNEWHSYSLLFNGIDDVNVIVDGKSFKADERNPEILDDWPLHKTK
ASKTKLVVGACWHGRQQKLAQFFRGQLSAIYLLSGAVESERAIKCAHTCPEQLQFTGVDE
LLDGQSATFSPDLTTLTLKAETSKQMGQMLKRIAYVNTQEKPTPGHRAFHVETEVTCKQD
DKKVKLPQTKGYVFVQQAAEPTLSISASSQLKSTQHMVKVGQAMVPDLTITISQNNIDGE
LEDVTQSHKIDYCKMHLQPARDMDVEYFSSPASLIAALNIEFEHDKDGILLRGEESAQGY
KEVLSKVHYFNTRPESYAKRTYTVQCAMLKGRVLSNQLFVTMTIEEVTTTTTTTTEAPIQ
AVDPIQFNFNSGETALDSLELIERHFEPAFDQLGSSRLQNILEMDLPRPKALLSHHGYDV
GQGAIAGGAVAVVVVVCVGFLLVLLVIGVLKMRDTPMPRRRRQKRQSDGGMHWDDSGMNI
TVNPLDDVEKNGGAIDEFSDEEEEEETDGESECSYREEDEDVSEDEEDQTEVLPHMDANQ
RVVGGLEWDDEDAISTNARSYRV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactgcttaccttcttttcgttggagcccttctaggcgtctcatacgccaaacat
catcatgctgctcgagctccaatcataaatctacaaggagccgaagagctggttgctgtg
gtgcgcgaggacgagaatatcatctcgacagtgccagattttgcgattctctcggaaacc
ggaccagtctgcaactacattctcacttcgcaaaacaatgaaaacgttccattcgatatc
caagtcgttgataagtacaccggagctgctgttcttagagtcaaggatgccgctgttctt
gattgcaagaagccagaatacaatctccaagttcaagcagtcaagtgcgacaacgacaat
gtgaaatccgagggagtctcactcaagatccgtgttaaggacaccaacaaccacgctccg
gaaatcgagaatccatggtacacattccatgtggaagagggaaaagtcattgatgaagtc
ggtgtgctcaaagcatctgacaaggactgtggacatcctaacggtgaaatctgtgagtat
gagatcaccaacggacttaaggaacttccatttgcgatcaacaaccaaggagttctccgt
accactcagccactcaacttcactcaatccaagtcatacatcctcaccgtggttgctatc
gattgtgccatgcgcaagagcaagagttcactcgtcacagttcatgttgatgagaaatgt
gtccaaggaatcaccgcaatgaacgagagagtgaactatgctgctggaaccggatccaag
cttctgctcccagatgtcgctcttgaattctgtgagaagaaatctgtctgcgaaccaaag
agtattcaatccatcattgagctccgtgctggacacgtcactcaaggatgcgccagggat
actgtctacgacaatcagaccatccaatcttgcggtctttccactgccaccgtcaagctt
ctcaacgaggaagccctcaccagttccgctgaaaatcacattttggcagaccaaggaatc
gagtttgatggagccagaggattaaccgtcgatgataatgttcatcagggacttatttcg
gatcacttcactttgagcttctcaatgaaacatgccgctggaaccaaggatgagcagagc
aataagcagaacattctctgtgaaagtgatgatttcaacatgaatcgccaccatttctct
gtctacatacgtcactgcaaattggaggttgttcttcgtcgtgaatcaggagccactgct
gatttccgtgctgctgaatggcgttggtcaatgccagaggtgtgcgataacgagtggcat
tcgtactctcttcttttcaatggaattgatgatgttaatgttattgttgatggaaagagc
ttcaaggccgacgagcgtaatcctgagatccttgacgactggccgctccacaagaccaag
gcatccaagacgaagcttgtcgtcggagcatgctggcacggacgtcaacagaaactcgct
caattcttccgcggacaactttcagccatctatcttctctccggagctgttgagagcgag
agagccatcaagtgtgctcacacctgtccagaacaacttcaattcacaggagttgatgaa
cttcttgatggacagagtgccacgttctctccagatttgacaactctcaccttgaaggct
gagacttcaaagcaaatgggacagatgctcaagagaattgcttatgtgaacacccaagag
aagccaactccaggacatcgtgcctttcacgttgagactgaagtcacatgcaagcaggat
gacaagaaggtcaagcttccacaaaccaaaggatacgttttcgttcaacaagccgccgaa
ccaactctttcgatctcagcttcatcccaattgaagagcacccaacacatggtgaaggtc
ggacaagccatggttccagatctcacaatcaccatcagccagaacaatattgatggagag
ttggaagacgtaactcaatcccacaagatcgactactgtaagatgcaccttcaacctgct
cgtgacatggatgtcgagtatttctcgtctccagcctcactcatcgccgccttgaacatc
gagttcgagcatgacaaagatggaattcttctccgcggtgaggaaagtgctcaaggatac
aaggaagttctctcaaaggttcactacttcaacactcgaccagaatcgtacgccaagaga
acgtacactgtccagtgtgccatgctcaagggacgagttctcagcaatcagctgtttgtc
acgatgaccatcgaggaagttaccactacaacaaccaccaccacggaagctccaattcaa
gcagttgatccgattcagttcaatttcaattctggagaaactgctcttgacagcttggag
cttatcgagcgtcactttgagccggcttttgatcaacttggaagctcaagacttcagaac
attctggaaatggatcttccacgtccaaaggcgctgctctcccaccacggatacgatgtc
ggacaaggagcgatcgctggtggcgccgtcgccgtcgtcgtcgttgtttgtgtcggtttc
cttctggtgctcctcgtcatcggtgtgctcaaaatgcgcgatacaccgatgccacgacga
cgaagacagaagagacagagcgacggaggaatgcattgggatgatagtggcatgaacatc
actgtcaatccattggacgacgttgagaagaacggcggagctattgatgagttcagtgat
gaggaagaggaagaagaaaccgatggagagagcgagtgctcataccgcgaggaggacgag
gacgtttccgaggatgaggaggaccaaaccgaagttcttccgcatatggatgccaatcaa
cgcgtcgttggaggtctcgagtgggacgatgaagacgccatttcgacaaatgctcgctcg
tatcgtgtctaa
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