KEGG   Caenorhabditis briggsae (nematode): CBG_02663
Entry
CBG_02663         CDS       T01054                                 
Symbol
Cbr-atg-16.2
Name
(RefSeq) Protein CBR-ATG-16.2
  KO
K17890  autophagy-related protein 16-1
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04136  Autophagy - other
cbr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    CBG_02663 (Cbr-atg-16.2)
   04136 Autophagy - other
    CBG_02663 (Cbr-atg-16.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_02663 (Cbr-atg-16.2)
   03029 Mitochondrial biogenesis [BR:cbr03029]
    CBG_02663 (Cbr-atg-16.2)
Membrane trafficking [BR:cbr04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    CBG_02663 (Cbr-atg-16.2)
 Others
  Specific organelles associated proteins
   Auto phagosome
    CBG_02663 (Cbr-atg-16.2)
Mitochondrial biogenesis [BR:cbr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CBG_02663 (Cbr-atg-16.2)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ATG16 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 8572447
NCBI-ProteinID: XP_045092241
WormBase: CBG02663
LinkDB
Position
II:complement(9274322..9276113)
AA seq 552 aa
MTKDADELTSVRLEILNRLKQKECQQKNLKTMLSHYCMLDQQLQQAQRSRSVSVNQEVQN
GTVDERLAVMKEEMANVYRMKSKNDQDLIDANRKLADSEARHSLVASQRDKLRKEVGVML
DKMKTLEEELADLREKNTAINTERVALVATCNFLTEKKTQLDTERFQLLNKIRELQEKSA
EYMNAEIALQEERAQLRIREQIARATADLNLNDDRVLASFETPEADEFMMTDVLPSEVKF
RMTAHEGEVHDVEWMSDDMFATAGSDSKVRIWRVSPNKTDATKVSTLTGCVGPINRLDYD
AQRHVILASSNDKTCRLWNVDSQRLLSTFSGHSDKVSAARQINFNFTYAIIHNFIFRLFQ
SHNVISGSADRTIRQWDISSIRCLRSYLVGSTIFDIATGCGTSQANFISSHFDKKVRFWD
ARSSEPTHAVELGQKVSSLDVSLDGLQVLASCRDDTLSLIDTRNYGIIHLYSAEQYKTSC
DSTRAIFSSTGEFVLAGSSSSSVYIWNTKSTKLEKVVRTARDDSNQIMSLSWNPSGRGLL
ACDRQKMCTLWR
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgacgaaagacgccgacgaactaacatcagttcgtctggagattctcaatcgattaaaa
cagaaggaatgccaacagaagaatttgaaaactatgctaagtcattattgcatgttagat
caacagctacagcaagcccaaagatcccgatcagtatctgttaaccaagaagtacaaaat
ggaactgtagatgagagattggcagttatgaaagaggaaatggcgaatgtgtacagaatg
aaaagcaagaatgatcaggatctgattgatgcaaatcgaaaactagctgatagtgaagca
cgacattctttggtggcatctcagagggataagctaaggaaagaagtgggtgtgatgttg
gataaaatgaaaactcttgaggaagaactagcagatctaagagaaaagaatacagcaatc
aacacagaaagagtggctttagttgcaacttgcaattttttgactgaaaagaaaacacag
ttggacaccgaacgcttccagttgttgaacaaaatccgggagctacaagaaaaatcagca
gaatatatgaatgctgaaatagcacttcaagaagaacgagctcaattacggatacgagaa
caaattgcaagagccacagctgatttgaatttgaatgatgatcgagttttggccagtttc
gagactccagaagccgatgagttcatgatgacggatgttttgccttcagaagtgaagttt
agaatgacagctcatgaaggagaagtgcatgacgtggaatggatgtcagatgacatgttt
gcaaccgctggaagtgattcaaaagttcgaatttggagagtgtctcccaacaaaacggat
gcaacaaaagtgtctacgttgactggatgtgtcggaccgattaatcgattggattatgac
gctcaaagacatgtgattctcgcatctagcaatgataaaacatgcagattatggaatgta
gactcgcaaagacttctcagcacattttcaggacattctgataaagtttcagcagcaagg
caaattaatttcaattttacatatgccataattcataattttattttcagattattccaa
tcacacaatgtaatttctggatcagcagatcggacaatcaggcaatgggatattagcagc
attcggtgtcttcgatcttatctagttgggtcaaccatttttgatattgctacaggatgt
ggaacttctcaagccaattttatttcttctcatttcgacaaaaaagttcgtttctgggat
gctcgatcttctgaaccaactcatgcagttgaactgggccagaaagtcagttcactagat
gtatctctagatggacttcaagttcttgcttcctgtagagatgacacgttgtctctaatt
gatactcgaaactatggaatcatccatttgtactctgctgagcaatacaagaccagttgc
gacagtactcgagcaatcttctcatctactggggagttcgttctggctggatcatccagt
tcttccgtttacatctggaacacaaagagtaccaagcttgaaaaagttgtgagaactgcg
cgtgatgactctaaccaaatcatgtcattatcatggaacccttctggaagaggacttctt
gcttgtgatcgtcagaagatgtgcactctttggagataa

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