Caenorhabditis briggsae (nematode): CBG_02686 Help Entry CBG_02686         CDS       T01054                                  Symbol Cbr-abcx-1 Name (RefSeq) Protein CBR-ABCX-1   KO K14772   U3 small nucleolar RNA-associated protein 20 Organism cbr  Caenorhabditis briggsae (nematode) Brite KEGG Orthology (KO) [BR:cbr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cbr03009]     CBG_02686 (Cbr-abcx-1) Ribosome biogenesis [BR:cbr03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     CBG_02686 (Cbr-abcx-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UTP20_N ABC2_membrane_7 DUF7078 RPN6_C_helix Motif Other DBs NCBI-GeneID:  8572467 NCBI-ProteinID:  XP_002630952 WormBase:  CBG02686 UniProt:  A8WTR2 LinkDB All DBs Position II:complement(<9188241..>9195598) Genome browser AA seq 1666 aa AA seqDB search MSSEDVRIETLEEDGSSGRDSIYFSTIRSRHADHFFADMLNHNTKEEKKRVIRYLEYDEI NSISMRPYPNLLLNKLSFSKDLRSSSDKALLRLPVLKQEFHNVSLELTSADVMALLYTKE SEMLSLLRVICGIRDLRGKLSGDILINGHRMSRDRLEKTLAFVSMEPPISTLTVRQYLHV HGKFNPPMIERYGGVGHLVSYALEKPEINKLQINKLMTDLGLMPVCDIICSRLNRSQWER VKVAAQLIRDPTILVISDVFKDIDVHDQCFLIEYLREWAVKTNRIVIMAVSPTSPQILKM FSKTMILASGRVVYFGAPKSMQQYFESVGCPCPPYKNICDYYVDLVTHDNLTSDASRESS VRIARLVNKWNQTAPPVRRTASGKFLLDLPSAGVLRRAFTVLSLFWFNFSNNRVSRMGFV LFVFSLSTILSLYLSDLTLTLPDAFLDRNSFMDLVILYFPMLLGLLILKKSEWKSIKIYL NFYFLGRHRLKEFLKLYSFRNNCSSLLLVVLSVIVELPFTMLTSAVFAIPVSIFTDYQRK SSSYATSFVSLSSTMFLNITVTQLLANSLCSLHSEPLSFFFSVVSWFLFFISTGFPVPIS SMLKTFSPVFSPSFFLFKFLYEEILRIHFFSEKIRILFQIRCIYFLAKMEELNEDELFAR YYAAKKQFKKVKKYLTFNERIAQMGGDNGRFSRKLTADTSYETYFEDAVENWRGEDQGPD LQEFIMAIQVKDIKTYAQLLHRSDEIFNVLCEHLAKPESRSIPALCGILSALARDLRENF NGHCWKSIEILVNLLDLGERVAENMEAAYLCFSILVKVQANFLAKQLKKSFTNFLPLFAS SRDFARRFAAEAFAYLLRKSTDLRSISGFVTKQSFKTPHNYLSDGCALLFYNTFVGIAGN FHSNSEQLFRDIVHALVHAESEDVEKSEEFHDFCVKILMQMVGYTIEYARNSTNDKRFFY QNVLTTMLGESKTMKEVISLMRLLHPCIVLKNEELMNEVTKKKKKKEKDNKKNKGKNELK KAEKVEFVCVTELKKSLENAVKVADFELEHYSVDFISETLLTIFNDDKNRLFSRDIALKI VEKTKNYQTIIELLLKTINLESFDLYMMPALGKIATEIIKNPDNSSLMKQIVSFYSILCS TRRPIRETVDRESRSNFFDLSNHYPFRDWLVNNFKFEIRRTLSFEYIIDMVVAWPWLYSQ ADSVKGSEDILDTLLEAIQSSNTSILNGQLVNACTAGLYLTNKNLLKKVPKEDVEKFLER QKCSESSLLAFEMFVSVYGVSREVEHMNKVVDLLFPAIFSSNGLVRQKVFKILSSFELPL PKIVDEEENVRQQTKSVFEVLYEAEDSELTNFRERLLHLRKLRHGDHKEFIPIGSSEKVE MMIVADLVSQFFVGFSPLWKGVYEVLATFANEMNIDTFWNVLNLWINNVNDNINNGERET EKGRLVGIDQTNRSDFVNARMQLFNFMETIPDVVERRTRVIIPAAKSVYMEPQILQMYEQ LLGSRYESIQKAALSCIFSYRNTILAKYRENLAALIDEKTLRQTLPSFKLSNDEGDVQVA DEHRSVVVPILLRLLSGKLLINNKQKGMISRRNGIIYIIGGCRSDELTFFLQLFFKQVYK VFGEKSLFGCGKLNCLFGQGETFEDIEKKCSKLLFLTNVHIKVFQK NT seq 5001 nt NT seq  +upstreamnt  +downstreamnt atgtcttctgaagatgttcgcatcgaaactctagaagaagatggaagtagtggaagagat tcaatatatttttctacaatcagaagtcgtcacgctgaccatttctttgctgatatgctt aatcataacacaaaagaagagaaaaaaagagtgattcgatatcttgagtacgatgaaatc aattcgatatctatgcgtccttacccaaatcttctccttaacaaactttcattttccaaa gatctcagatcgtcttctgacaaagctcttcttcgtttacctgtcttgaagcaggaattt cataatgtatcgctggagttgacaagtgctgatgtaatggcacttctgtacacaaaagaa tctgaaatgttgagtttacttcgagtcatctgtggaattcgcgatttgagaggaaaactg tctggagatattctaatcaatgggcacagaatgtcaagggatcgattggaaaagactctt gcattcgtgtccatggagccacctatttctactctcactgtccgtcagtatcttcatgtt catggaaaattcaatccaccaatgatagaaagatatggaggagttggtcatctggtatcc tatgcactggagaaaccagaaattaataaacttcagataaacaaactgatgactgatctt ggcctgatgccagtatgtgatataatctgcagtcgtctgaatcgatctcaatgggaaaga gtcaaagtggctgctcagttaataagagatcctacgattctggtgatttccgacgttttc aaggatattgatgttcatgatcaatgctttttgattgagtatctcagagaatgggcagta aaaactaatcggattgttataatggcagtgtccccaacaagtccacaaattctgaagatg ttctctaaaacaatgatacttgcttctggtagagtcgtctactttggagctccaaaatct atgcaacaatactttgaatctgttggctgcccttgtccgccatataagaatatttgtgac tattacgttgacctagtaactcatgacaacttgacatcagatgcttctcgtgaatcatca gtgaggatagcgagacttgtgaataaatggaaccagactgctcctccggtaagaagaact gctagtggcaagtttcttcttgatctaccatcagctggagttctaaggagagcatttact gtgttgagtctcttctggttcaacttcagtaacaatcgagtgtctcggatgggatttgtt cttttcgtcttttctttatccactattctttctctctatttatcagatctcacattaact ctccctgatgcatttctggatcgaaattcttttatggatctagttattctatattttcct atgctgttgggattgttgatattgaagaaaagtgagtggaaatctattaaaatatatctc aatttttattttctaggtcgacatcgtctgaaagaatttctgaagttatattcatttcga aacaactgctcgtctctgttacttgtagttttgtcagtaattgttgagctaccatttaca atgttaacttccgcagtttttgctattccagtttccatcttcacagattaccaacggaaa tcatcaagctatgcaacttcgtttgtttccttatcttctacgatgtttctcaatatcact gtaacacaactgcttgctaattcactgtgcagtttacacagcgaacctttatcctttttc ttttctgtagtttcgtggtttctcttcttcatctccacaggtttcccggtgccaatttct tcaatgctcaaaacgttcagtccagttttctctccatccttcttccttttcaaatttctt tacgaagaaattttgcgaatacattttttttcagaaaaaattagaatacttttccaaatt cgatgtatatattttttagcaaaaatggaggagttgaacgaggatgaattgtttgctaga tattatgcagctaaaaagcaatttaaaaaagtcaaaaagtatctcactttcaatgagcgg attgcacaaatgggtggtgataatggtcgattttcgcgaaagttaactgcagacacttcc tacgaaacgtatttcgaagatgctgttgaaaattggagaggagaggaccagggtccagat cttcaagaatttatcatggccattcaagtgaaagatatcaagacatatgctcaattattg cacagatcggatgagatcttcaatgttctctgcgagcacctagcaaaaccagaatcacgc tcgattcctgcattgtgtggaattctttcagctcttgcacgagatcttcgagagaatttc aatggacactgttggaaatcgatagaaattctggtcaatcttttagatcttggtgaaaga gtggccgagaacatggaagctgcctatctctgtttttcgattcttgttaaggttcaagcc aattttcttgcaaaacaactgaaaaaatcgttcacaaattttctaccgctattcgctagt agcagagactttgcccgccgattcgctgctgaagcgtttgcgtatcttcttcgcaagtcg actgatttgcgatcaatttccggattcgtaacgaaacaatcgttcaaaacaccccataac tatctttctgacggttgtgctcttctcttctacaacacttttgttggaatcgctggaaat tttcatagcaattctgagcagctattcagagatatcgttcacgctctcgttcatgccgag tctgaagatgttgagaaatctgaagagtttcatgatttttgtgtcaaaattctcatgcag atggttgggtacacaattgaatacgctagaaactctaccaacgacaaacgattcttttat cagaatgttttgacgactatgcttggagaatcgaaaacaatgaaagaggtgatcagtttg atgcgtttgctccatccttgcattgttctgaaaaacgaagaattgatgaatgaagtgacc aagaagaagaagaagaaagagaaagataataagaaaaataagggaaagaatgagctgaaa aaggcggaaaaggtggaattcgtttgtgtgaccgagctgaagaaaagtcttgagaacgca gtgaaagttgcggattttgaattggaacattattcagtagattttatcagcgagacactg ctgaccattttcaacgatgacaaaaatcgactgttttcaagagatattgcactgaagatt gtggaaaaaacgaaaaactaccaaaccatcattgaacttttgttgaagaccattaacctg gaatcctttgatttgtacatgatgcctgcgctgggaaaaattgcaacagagattatcaag aatccggataatagcagtttaatgaaacaaatcgtcagtttctactcaattctgtgctcg accagacgcccgattagagaaactgtggacagagaatctcgatccaacttcttcgatctt tccaaccattaccctttcagagattggcttgtaaacaatttcaaatttgaaattcgcaga acgctcagctttgaatacatcatcgacatggttgtggcgtggccctggctttattcgcaa gctgattctgtaaagggatcggaagatatcctcgacactcttctggaagcaatccagtct tcaaatacaagcattctgaatggtcaactcgttaacgcatgcacggctggtctttattta accaataagaacttgttaaagaaagtaccaaaggaagatgttgagaaattcctggagcgt caaaagtgctctgaatcttcgcttcttgctttcgaaatgtttgtttctgtgtacggagtc tctcgagaagtggaacacatgaacaaagtggttgatttgcttttccctgccattttcagt tctaatggtctagttcggcagaaggtcttcaagattttgagcagttttgagctaccgcta cctaaaattgtcgatgaagaagaaaacgttcgtcaacaaacgaaatcagtattcgaagtt ctgtatgaagcagaggacagcgagctaaccaacttccgagaacgtttattgcatctccga aaacttcgtcatggggatcataaagagtttattccgattggctccagcgaaaaagttgaa atgatgattgttgctgatttggtttcccagttcttcgtcgggttctccccactctggaaa ggagtttacgaagtgttggcaactttcgcgaatgaaatgaatattgacactttctggaat gtcctgaatttatggatcaataatgttaatgataacatcaacaatggagagcgggaaacg gagaaaggcaggcttgtcggcatcgatcaaacgaatcgttccgattttgtgaatgccaga atgcaactgttcaatttcatggaaaccattccagatgttgttgaaagaagaacacgagtt atcattccagctgcaaagtctgtttatatggagccgcaaattctgcaaatgtatgaacaa cttcttggatcacgttatgagagtattcaaaaagctgcgctctcttgtatcttctcgtac agaaacacgattcttgccaaatatcgcgagaatttggcagctttgattgacgagaaaaca ctcagacaaacccttccgtcgtttaaactgtccaatgacgaaggtgacgttcaggtagcc gacgagcatcgatcagtcgttgtgccgatacttttgcgtttgcttagtggaaagttgctc atcaacaacaagcagaaaggcatgatttcacgacgaaatggaatcatttacatcattggt ggatgccgtagcgacgagctgacgttcttccttcagctatttttcaagcaagtctacaaa gtttttggtgagaaatcgctgtttggatgtggaaaattgaattgtctgtttggccaagga gaaacgtttgaggatatcgagaagaaatgctccaaattattgttcctcacaaatgttcac atcaaagtattccagaagtaa

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