Caenorhabditis briggsae (nematode): CBG_02689
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Entry
CBG_02689 CDS
T01054
Symbol
Cbr-wrn-1
Name
(RefSeq) Protein CBR-WRN-1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_02689 (Cbr-wrn-1)
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_02689 (Cbr-wrn-1)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBG_02689 (Cbr-wrn-1)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CBG_02689 (Cbr-wrn-1)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CBG_02689 (Cbr-wrn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
HTH_22
Motif
Other DBs
NCBI-GeneID:
8572470
NCBI-ProteinID:
XP_045092235
WormBase:
CBG02689
LinkDB
All DBs
Position
II:complement(9172450..9176215)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSDDEELPPTRPGSDEEELPETDVEEGEEDLGETEPEVESDDSFDKATTSKPVVDEDYDS
FDDFVPSQVPSQTKKLSHKRTLEETVVSESSSEDSDAGNDSEFVPVEETQEDEFPHRRYT
LRERSVAKEEKKNVWDDGETSKESEEIVLDDSLDDSEFVDSVLDKKTSVKRKNTFLDDGE
FFTNGNCFQIDKETKNKWANMVDPPPEALKALNEFYGHKGFRDKQWNVVRNVLAEKDQFV
LMSTGYGKSVCYQLPSLLLNTMTVVVSPLISLMNDQVTTLVAKGIDAVKLDGDSSQKEWD
RVSNNMHRIRFIYMSPEMVTSSRGLELLSACREHLSLLAIDEAHCVSQWGHDFRNSYRHL
AAIRNRSDLCTVPLIALTATATVRVRDDVIENLKLRKPLITTTSFDRKNLYISVNSSKDV
ATDLSVFLQTDDVKGRHFGGPTIIYCQTKQMVDDVNTVLRRIGVRSAHYHAGLSKTQREK
AHKEFMHDKVRSVFLDHIPISFKDYNDRCNCRIWNGIDKPDVRNVIHYGCPKDIESYYQE
IGRAGRDGAPSVCRVFFAPKDLATIKFKLRNNPQMSEEVLENLNLMLRQLELVLTTVGCR
RYQLLKHFDPSFVKAATPQADCCDRCTEMLNGNQDSTSSTIDVTTESKWLFQVILELYNG
KTGIGKPIEFLRGSDKEAWRMKNISQKQLFGIGKSLPEKWWRALGSSLRLAGYLGDVRTM
QMKFGSCTVLTDTAERWMLNGKELKIEATPVLLQGKKEKNVPKVSSGASKSSTSNAVQFD
EKKILGAHKQREYVAAQDFEPLKNMKQDIEEGLPEKIRQLRTCLDDLRVEMANMYEVAPF
QIVSNSVLDGFANLRPSSVSKLNVIDGMSAVQKTKYGKRFVDCVVKFSQETGVSMNVSAN
DTIPHHITSIMEKELAESIRRVYMHHLMTKQDAKQVAQARGISEGTVYNYLVIAVEKGLP
VYLDKLNVNRKNIAICLNAARTHLGSNVIRLAPWKEALGDVVDYNQLKLIRAVLIYEFGI
EESKEDAASPKVPSAVNHPPTPRPPPVASTSRAPPMKKFKL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgacgaagagttgccgccaactcgtccaggttcagacgaagaagaacttccg
gagactgatgtagaagaaggagaagaagatttaggagagacggaacctgaagttgaatcg
gacgattctttcgataaagcgacgactagcaaaccagtggtcgatgaagactatgattcg
ttcgacgactttgttcccagtcaagttccgtctcaaaccaagaagttgagccataaacga
actctagaagaaaccgttgtctcggaatcgtcatcagaagattcagatgctgggaatgac
agtgaattcgttccggtggaagaaactcaagaagacgagttccctcacagacgttacact
ttaagagaacgatctgttgctaaagaagagaaaaagaacgtttgggatgatggagaaact
tcaaaagagtcagaagaaatcgttcttgatgattctctagatgattctgagtttgtggat
tctgttctggataaaaagacgtctgtgaaacggaagaatacctttctggacgacggagag
tttttcacaaatggaaattgttttcaaatcgacaaagaaaccaaaaataagtgggctaac
atggtggacccacctccggaagcattgaaagctctcaacgaattctacgggcacaaagga
tttcgagataagcaatggaatgtcgttcgaaatgtgttagcagaaaaagatcagtttgtg
ctgatgtcaactggatacggtaaaagtgtgtgctatcagctgccatcacttcttctgaat
acaatgactgtggtggtttctcctttgatttcactaatgaatgatcaagtgacaacattg
gttgcgaaaggaattgatgctgtgaagctggatggtgactcaagtcagaaagaatgggat
cgagtttcaaataacatgcatagaatcagattcatatatatgtctcccgaaatggtaaca
agcagcagaggactggaacttctatctgcatgtcgagaacatctttcccttctggcaatc
gatgaagctcattgcgtttcacaatggggacacgactttagaaattcatatcgtcattta
gcagccattagaaaccgatccgatctttgcactgtcccactgattgcattaacagctacg
gctactgttcgagttcgagatgacgtcatcgagaacttgaaattgagaaaaccactaatt
acaacaacatcgttcgaccggaaaaatctgtatatttctgtgaattcttccaaggatgtg
gctactgatttgtcggtatttttgcaaaccgatgatgtgaaaggaagacattttggtggt
ccaactattatttattgtcagacaaaacagatggtggacgatgtgaataccgttttgaga
agaattggagttcggtctgctcattatcacgctggactttcgaagactcaacgcgaaaaa
gcacacaaagagttcatgcatgacaaggttcgttccgtttttctagatcatataccgatt
tcttttaaagattacaacgatcgttgcaactgtcgcatttggaatgggatcgacaagcct
gatgttcggaatgtgattcactatggatgcccgaaagatatcgaatcgtactaccaggaa
atcggcagagctggaagagacggtgctccgagtgtctgtcgtgttttctttgctcccaag
gatttggctactatcaaattcaaactacgaaacaatccgcaaatgtcggaggaggtgttg
gagaatctaaacctcatgttgagacagctagagctcgtgctgactactgttggttgcaga
agatatcaacttctgaaacatttcgacccatcattcgttaaagcagctacaccacaagcg
gattgttgtgatcgatgtacagaaatgttgaatggtaatcaagattccacatcaagcaca
attgatgtaactactgaatccaaatggttattccaagtgattcttgaactatacaacgga
aaaactggaatcgggaaaccaatcgaatttttgagaggatcggacaaagaagcgtggaga
atgaagaacatatctcagaagcaacttttcggaatcggaaagagcttaccggagaaatgg
tggagagcactgggatcgtctctccgattggctggatatctgggagacgttagaacgatg
caaatgaaattcgggagctgtacagtcctgacggacacggcagagaggtggatgctgaat
ggaaaagaactgaaaatcgaggcaacaccggttttattgcaagggaagaaggagaagaat
gttccgaaggtgtcttctggagcctcgaagagttccacttcgaacgcagttcagtttgat
gagaagaagattcttggagcccacaaacaacgagaatacgttgctgctcaagatttcgaa
ccactcaaaaacatgaagcaagacattgaagaaggtcttcctgaaaagatacggcaattg
cggacctgtctggatgatctacgtgtggaaatggctaacatgtacgaagtggctccattc
caaatcgtttccaactccgtactggatggttttgctaatttgcgacctagctcagtgtca
aaactgaatgtgattgatggaatgtcggctgttcagaaaacgaaatatggaaagcgtttt
gtggattgtgtggtgaagttctcgcaagaaactggagtttctatgaatgttagtgcaaat
gataccataccacaccatatcacatctattatggagaaagagcttgctgaatcgattcgc
agagtctacatgcatcatttgatgaccaaacaagacgcgaaacaagttgctcaagcacgc
ggtatcagtgagggtactgtctacaattatctagtgattgctgttgaaaagggacttcct
gtgtatctggataaactgaatgtcaatcggaaaaacattgcgatttgtctcaacgctgcg
aggactcatcttggttccaatgttattcggcttgctccatggaaagaggctcttggagat
gtagtagactataatcagttgaaactgatcagagctgttctaatttatgaatttggaatc
gaagagagtaaagaagatgctgccagtccgaaggtaccatcggctgtgaaccatcctccc
acaccacgtccacctccagttgcatcaacatcccgtgctccaccgatgaagaagttcaaa
ctataa
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integrated database retrieval system
