Caenorhabditis briggsae (nematode): CBG_02888
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Entry
CBG_02888 CDS
T01054
Symbol
Cbr-aars-1
Name
(RefSeq) Protein CBR-AARS-1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_02888 (Cbr-aars-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_02888 (Cbr-aars-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_02888 (Cbr-aars-1)
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
CBG_02888 (Cbr-aars-1)
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CBG_02888 (Cbr-aars-1)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_02888 (Cbr-aars-1)
Prokaryotic type
CBG_02888 (Cbr-aars-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
8572627
NCBI-ProteinID:
XP_045092177
WormBase:
CBG02888
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All DBs
Position
II:complement(8320318..8323110)
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AA seq
807 aa
AA seq
DB search
MNTGTKLIKAHVGAFETFRTYHSHLELRKSFFDFFQSKKHEIVKSASVIPLENDGSLLFT
NAGMNQFKSLILSSTEPRRVANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA
FSKEEACKFAWDYLVEVLGIDSERLYVSYFGGIEKLGLPEDRECKEIWKNIGVPSHRILP
FVAENFWEMGAAGPCGPCTEIHYDRIGGRDASSLVNIDDSVVEIWNIVFMSNVRDSSGKI
YNLGRNHIDTGMGFERLLSVVQNKNSNFDTDVFIPILAKISSLTKKNLKYNGSVSSQEDA
VFRLVADHVRASTIAISDGAIPDGTGNGFIVRKMMRRSFLQGNSKLGIDRFGLSDLVPTV
ISTLVGVKNVYSEVEKSSDKIINIFKEEETQFWKTVDKAKKMFDVGANENKSSTISGRKA
FNLFETYGLPLSVTIEMARNLGKEVDEKEFERCQLEAQKLSQKASQFKLPVFAKDFPTHS
DKEKYSYSFENGRYAFSKVPTTILQVYQNQEKVVVLKENEKGFVVLERCQFYAEQGGQKS
DIGKLLADGRNVFEVESAKKLDNGSVTVLFGRALEPIQKDLRVEQQLDEKRREGVMKAHS
ATHLLNWALQRSGLGNGQKGSSVDCNRLRFDYSTGDDSLDKSQRTEALKHLEHILNEFIM
KGGLTSVIETTLEEAKKIKNLQSDVKEDRIGDSSVRVVTLGSGVNVSVECCSGTHVHDVS
IIEDVAIMSDKSMGQNLRRIVAVTGEEAKKCREYAEKVFEELSSTEFKERNKILKVLKRN
LFSETFLYSRRLIGSLFLLPIRLGYRL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgggaactaaattaataaaagctcatgttggagctttcgaaactttcagaaca
tatcattcacatctagaacttcgaaaaagtttcttcgattttttccagtcgaaaaaacac
gaaatcgtaaaatctgcgtctgtaattcctcttgagaatgatgggtctctccttttcaca
aatgctggaatgaatcaattcaaatctctgattctctcttccaccgaaccaaggagggta
gccaacattcaaaaatgtattagagctggaggaaaacataacgacttggatgacgttggc
aaagatttacatcatcagacttttttcgagatgatgggaaattggtctttcaacgacgcg
ttctcaaaagaagaagcgtgcaaatttgcctgggattacctagtcgaagtacttggaatc
gactctgaaagactgtatgtttcctattttggaggaattgaaaaacttggattaccagaa
gatcgggaatgtaaagaaatttggaagaacatcggagttccttctcatcgaatacttcca
tttgttgctgaaaacttctgggagatgggagcagctggaccttgtggaccgtgtactgaa
attcactatgatagaattggcggaagagatgcttctagtcttgtgaacatagatgattcc
gtagtagaaatttggaatatcgtttttatgagcaacgttcgtgactcttctggaaaaatt
tataatttgggaagaaaccacatcgatacagggatgggtttcgaacgtcttctctccgtt
gttcagaacaaaaactcaaactttgataccgacgttttcattccaattcttgctaaaata
tcatctctaactaagaagaatctgaaatacaatggaagcgtatcctctcaagaagatgca
gtttttcgtcttgtggctgatcatgttcgtgcttctacaattgctatcagcgatggagca
attccggatgggactggaaatgggttcattgtccgaaaaatgatgagacgatcttttctc
caaggaaattcaaaactgggaattgaccgattcggattgagtgaccttgttccaaccgta
atctctactttggtaggtgtaaaaaatgtctattcagaagtggaaaaatcttctgacaag
ataatcaatattttcaaagaagaggaaacccagttctggaagactgttgataaagcaaaa
aagatgttcgatgtcggtgccaacgaaaataagtcatctacgatatcaggaagaaaagct
ttcaacttgttcgaaacctatgggttgccactatcggtcacaatagaaatggctagaaat
cttgggaaggaagtagatgagaaagaatttgaaagatgtcaactagaagcacaaaagcta
tctcaaaaagcttctcaatttaagttaccagtttttgcaaaggatttcccaactcattct
gacaaggaaaagtattcatattcttttgaaaacgggagatatgctttttccaaggttcca
acaacaattctgcaagtgtaccagaatcaggaaaaggttgtggttttgaaagaaaatgaa
aaagggtttgttgttctggaacgctgtcagttttatgctgagcaaggaggtcagaaaagt
gatattggaaaacttttggctgatggtagaaatgtgttcgaggtagagagcgctaagaag
ttagacaacggatcagttacagtacttttcggacgagctctcgagcctattcagaaagat
ttacgagttgagcagcagctggacgaaaagagaagagaaggagtgatgaaggctcactcg
gcgacccatttgctcaattgggcattgcaaagaagtggactcggaaacggccaaaaaggc
tcatctgtcgattgcaaccgactacgatttgactactcaactggggacgactctctggat
aaatctcaacgaacagaagctctgaaacatttagaacacatattgaacgagttcattatg
aaaggaggactaacttctgttattgaaacaactttagaagaggctaagaaaattaaaaat
cttcaatcagatgtaaaagaagatcgaattggagattcctccgtgcgagttgtaactcta
ggatctggtgtgaatgtttctgtagaatgttgttctggaacacatgttcatgatgtgagc
attattgaagatgtagcaatcatgtcagataaatcgatgggccaaaatcttcgacgtatt
gttgcagtgactggcgaagaagcaaaaaagtgcagggagtatgcagagaaggttttcgaa
gaattaagctcaacggagttcaaggaacggaataagattttaaaggttttgaaaaggaac
ttgttctctgaaacattcttgtattccagaagattgattggaagcttattcctcttgccc
atcaggctcggatatcgactttag
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