Caenorhabditis briggsae (nematode): CBG_02907
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Entry
CBG_02907 CDS
T01054
Symbol
Cbr-shn-1
Name
(RefSeq) Protein CBR-SHN-1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cbr
Caenorhabditis briggsae (nematode)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Ank_5
Ank_3
SAM_2
PDZ_6
PDZ
ANK_LRRK2
PDZ_2
FERM_f0
pEK499_p136
Motif
Other DBs
NCBI-GeneID:
8572640
NCBI-ProteinID:
XP_045092171
WormBase:
CBG02907
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Position
II:complement(8250478..8255795)
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AA seq
1137 aa
AA seq
DB search
MNQEEDPVNLQIFVPELNVRILESSINVFILFQKFLAVTQNDFIWDVKRKLLATLPQALP
QAFNYGLFLPPCDGRAGKFLLEDRTIRDYPFTDCVPYLELKYKKRVYKMLNLDEKQLKAM
HTKGQLKKFMDYVQQKNNEKVEKMCTQGLDANFHDSQGETPLTLAAGIPSNRAVIVSLIG
GGAHIDFRNSEGQTAMHKAAFLSSFENVKTLIELGASPNYRDPIGLTPLYYNMLTADSND
QVAELLLREAADIGVTDMHGNHEIHQACKNGLTKHVEHLLYFGAQIDAENVNGNTPLHVC
AVNNRPECARVLLFRGADHLTVNKQGQTALHVAHIVGNPAVADVVQAHNPSSSVPYRGTP
QYSTRRRLSSTITRRRSMSQSSICSQDVYRTPQSIRKTPMSAAPSPSPSRSSRTTVTPSE
YGTMRRSGMDSMRSMIAAGHETNIARILVIPRGVKGFGFILRGAKHVAMPLNFEPTAQVP
ALQFFEGVDMSGMAVRAGLRPGDYLLEIDGIDVRRCSHDEVVELIQQAGDTITLKVITVE
VAEMSRGGTIVHRPPTGKKHVLNEFYYYTHDAHGVDYYAPNDIRNAYSESRHASVRQRPG
SGRRISAAELENLMVRQRVPSVTGTPTYQMQYDQESLNGGYSSKKYNSVSDMKRRKGQRN
VVASSAGLNRSTFEPSFQPATSSFEYNCSSRSTPQLSHMDSFDSFDDEDDLPAPPPASYQ
ASDLSRDSSITRSEYSRPFRPTSRPKTPPPPPPMQHQHQQQYQQQSHPTLARSASQPQQV
HIQPQQSSIPPPPPPPPPPQCEPTMVQVEFTPPSTSSVPPPPPPPLPPISSGAPPPPPPP
PPGGLMHVAASAPVLTSNSKGISADALKSVQLKKAEPRESSSAASMNNNNNNKDSTTDFQ
MDLKNALAKRRSKVAHDVDEDEERESRFEGLSLRETVRENVVERGKGIQNIGIVNKKDSG
YTSSRTSLEPSESEEKDHRPHFSLDHSPNVQRVTLISQHLEDNYGQKDNMSVASASTAST
SSTVDLTKPGCFVVPSHVIPPVDYDDDPDSGTGDSDGEIRCSEISSFEHKKVDVWTVEDV
IGWLSSLHLSEYSPAFRNQRIDGRCLRQCDRSRFTQLGVTRIAHRQIIEAALRGILQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggaggatcccgtcaatttacagattttcgtgccagagctcaacgttcgg
attttggaaagttccattaacgtatttatcttattccagaagttccttgcggtgacccag
aatgatttcatctgggatgtcaaacgaaaattgcttgccactctacctcaagctcttccg
caagccttcaattatggcttatttctacctccatgtgatggacgagccggaaagtttcta
ctcgaggatcgaacaattcgtgattatccatttacggattgtgttccgtatctagagtta
aaatacaagaaacgtgtgtacaaaatgctcaatcttgatgagaaacaactgaaggcaatg
catacgaagggccaactcaaaaagtttatggactacgttcagcagaagaataacgagaaa
gtggagaagatgtgtacacaaggtcttgatgcgaacttccatgattctcagggagagact
ccattaacacttgctgctgggataccaagcaaccgagctgtaattgtgtccttgatcgga
ggaggtgcccatatcgatttccggaattccgaaggtcagacagcaatgcacaaagccgca
tttctctcttcttttgagaatgtgaaaactcttatcgagttaggagcaagtccgaattat
cgagatcccattgggctgactcctctttattataacatgttgactgccgattcaaacgat
caagtagcagaacttttgctacgagaagcagctgatatcggagttaccgatatgcatgga
aaccatgagattcatcaggcatgcaagaacggattgacgaaacatgtggagcatcttctc
tattttggagctcagattgatgccgaaaatgttaatggaaacacccctcttcatgtctgt
gctgtcaacaatcgacctgaatgtgctagagttttgttattccgaggagctgatcatctg
actgtgaataagcagggacaaacagcgttacatgtggcacatatcgtggggaatccagct
gtggctgatgttgtgcaagctcataacccaagctcttcagtcccctatcgtggtactcct
caatactctacccgaagacgattgagttccacaatcaccagaagacggtcaatgtcacaa
tcgtctatatgcagtcaagatgtctaccgtactcctcagagtatccgaaaaactccgatg
tctgctgcaccatcacccagtccatcacgctcttctagaaccacagtcactccatccgaa
tatggaactatgaggaggtcaggaatggattcaatgagatcaatgattgctgctgggcac
gagactaatatagcacggattctggtgattcctagaggtgtcaaaggattcggtttcatt
ttaagaggagctaaacacgtcgcaatgcccctgaacttcgaaccaactgcccaagtacca
gctcttcaattctttgaaggtgttgacatgtctggaatggcagttcgagcagggctcagg
cctggagattacttactggaaatcgatggaatcgatgtgaggagatgctcccacgatgaa
gtggttgaacttatccagcaagccggagacacaatcactttgaaagtgattactgtagaa
gtggcagaaatgagtcgaggaggaactatcgtgcatcgaccaccaacaggtaagaagcac
gtactgaatgaattctattattacacgcatgatgcgcatggagttgattactatgcgcca
aatgacatcaggaacgcctattcggaatcgagacatgcgtcggttaggcagaggccgggc
agtggaagaaggatctctgctgcggagcttgagaatctgatggtccgacaaagagtacca
tctgtgacagggacacctacatatcaaatgcaatacgatcaggaatcattgaatggagga
tattcgtcgaagaaatataattcagtgtcagatatgaaaaggaggaaaggacagagaaac
gtcgtagcatcttcagctgggttgaatagatccacctttgaaccatcgtttcagcccgcc
acttcatcattcgaatacaactgtagcagtcgaagtaccccacaactgtctcacatggat
tcattcgattcattcgatgacgaagacgatcttccagctccaccacctgcttcctatcaa
gcatcggatctttcaagagactcttcaataactagaagtgaatactctcggccgttccga
ccaacatctcgacctaaaactcctccaccacctcctccgatgcaacatcaacatcagcaa
caataccaacaacaaagtcatccaactctagcaagatccgcatctcaacctcaacaagtt
catatccaaccgcaacaatcttccattccacccccgcctccaccacctccgccaccacaa
tgtgaaccaactatggtacaagtagagttcacaccaccatcaacatcttctgtacctcct
ccaccacccccaccacttcctccgatctctagtggtgcaccacctccgcctcctccacct
ccacctggtggattgatgcatgtggctgctagtgctccagtattaacgagcaactcgaag
ggaatatcagcggatgctctgaaatcggtacagttgaagaaggcagaaccacgagaatca
tcatcagcggcttccatgaataataacaacaacaacaaggattcaacgacagacttccaa
atggatttgaaaaatgccttggcaaagagacggagtaaagtagcacatgatgtggatgag
gatgaggagagagaaagtcgatttgaagggttatctcttcgagagacggttcgagaaaat
gtagtggaacgtggaaaagggattcagaatattggaatagtaaataagaaggacagcggg
tatacttcttcccggacgtcattggagccgtccgagtcggaagagaaggatcatcgtccc
catttttcactggatcattctccgaatgtacaaagagttacattgatctctcaacatctc
gaggataattacggacagaaagataacatgtctgtcgcatcggcatcaacagcgtcgacg
tcttcaaccgtcgacttgacaaagccaggatgtttcgtagtcccgtctcacgtcattcca
cctgtcgattacgacgatgatccggattctggaactggggacagcgacggagagattcgc
tgtagtgaaatatcatcattcgaacataagaaggtagacgtctggacggttgaagacgtc
attggttggctttcctctcttcatttatccgaatattctccagcattccgaaatcaacga
atcgacggtcgttgtcttcgacaatgcgatcgctctcgattcactcaactcggcgtcact
cgaattgctcatcgtcaaatcattgaagctgctcttcgtggtattcttcaatga
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