KEGG   Caenorhabditis briggsae (nematode): CBG_02975
Entry
CBG_02975         CDS       T01054                                 
Symbol
Cbr-unc-53
Name
(RefSeq) Protein CBR-UNC-53, isoform b
  KO
K19483  neuron navigator 2 [EC:5.6.2.4]
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_02975 (Cbr-unc-53)
Enzymes [BR:cbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBG_02975 (Cbr-unc-53)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    CBG_02975 (Cbr-unc-53)
SSDB
Motif
Pfam: Ubiquitin_6 DivIC AAA RsgA_GTPase CH HALZ DUF2205 nSTAND3 AAA_24 AAA_16 AAA_14 Fez1 ABC_tran TSC22 ResIII AAA_5 AAA_22 DUF4618 YscO
Other DBs
NCBI-GeneID: 8572700
NCBI-ProteinID: XP_045100921
WormBase: CBG02975
LinkDB
Position
II:complement(7943170..7967061)
AA seq 1663 aa
MFPYYEEASSSVKGPTIILLRSMRDGFEEEKNDAIYTDWANRHLSKGALSRPIRDISNEF
RDYRLVSQLINVIDWKNFEKSGEKNRIYSDILKPVTEGFLIFNSISFSLLRTQKLSSYFS
RILPIPINEYSPTYTKRLAKITSNLDGLETCLDYLKNLGLDCSKLTKTDIDSGNLGAVLQ
LLFLLSSYKQKLRQLKKDQKKLEQLPVTTTTTAIMPPAVSNIPYSRLPSPRVPPASNPNS
NFTQMSTSRLQTPQSRISKPDSTKIGIKPKTTSGLRPPSTTSSNTNINSFRPSSRSSGNN
NVGSTISTSARSLGTHLNNLGFMQICNPFLDSSSAYSSISNLSRPTPSSQIQKPTSRLQT
QQVRVATTTKIGSSKLAAPKAVSTPKLASVKTIKTTTTEHDNSGGMLKLKLFSSKNASSS
NNSPQPLRKAEQSKIAAPVKTGLKPPTSSTNKLGSATSMSKLCTPKVSYRKPDTLLHTKS
DSKRCSKSSEEESGYAGFNSTSPASSSTEGSLSMHSTSSKSSTSDEKSPSSDDLTLNASI
VTAIRQPIATSAVSPVISKPVEEKPTLAVKGVSASKKDPPPTVPERTNQPTIGVVSPIMA
HEKLPSESTPSEKVDPNPEKISSMSIDCDLPPPPTPLKSLERVPPKMTPIRQPPTYDVLV
KQGKITSPVKSFGYDQVESSASEDSIVAHVQMAPPVQKTSAGQSSMERRIQKNKTSESSG
YASDAGVAMCAKMREKLKEYDDMTRRAQNGYPDNFEDSSSLSSGISDNNELDDISTDDLS
GIDMATVASKHSDYSHFVRHTSSSSSRPRVPSRPSTSVDSRSRVEQENVYKLLSQCRTSQ
RGAATATSSFGQHSLRSPGYSSYSPHLTVSADKDTMSMHSQTSRRPSSQKPSYAGSYSAR
SRGGSSTGIYGEPFQLHRLSDEKSPAHSARSEMGSQLSLASTTAYGTLNEKYEHAIRDMA
RDLECYKNTVDSLTKKQENYGALFDLFEQKLRKLTSHIDRSNLKPDEATRFRQDIAHLRE
ISNHLATNSMHVNVRLKMEDSGSSTRHFQEGAGELLRQPSLESVASHRSSMSSSSKSSKQ
EKISLSSFGKNKKSWALSVDSQIRSSLSKFTKKKNKNYDEGHMPSISGSQGTLDNIDVIE
LRQELKERDSALYEVRLDNLDRAREVDVLKETVNKLKNENKQLKKEVDKLTNTSTTRASS
RASLPYIQDDEHVYDHACSSTSASQSSKRSSGCNSIKVTVNVDIAGEISSIVNPDKEIIV
GYLPMPANNSTWKDIDDSILDSFEKYLSKIDLDRQLGLDAKDAIFGYQIGELRRVIGDSS
TIITSHPVDILTPTTTIRMFMYGAAQSRVDSMVLDMLLPRQMILQLVKSIVTERRLVLAG
ATGIGKSKLAKTLAAYVSLQTNQSEDKIVNITIPENNKEELLQVERRLEKILRSKEACVV
TLDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPELKTIPNFKMSVMSNRLEGF
ILRYLRRRAVEDEYRLSVQMPSELSRIIEFFPVALQAVNNFIEKTNSVDVTVGPRACLNC
PLTIDGSREWFIRLWNQNFIPYMERVARDGKKTLGRCTSFEDPTDIVTEKWPWFDGPNPE
DVLKRLQLQDLAPSPANSSRQPFNPLESLIQLHATKHQTIDNF
NT seq 4992 nt   +upstreamnt  +downstreamnt
atgttcccgtattatgaagaggcatcctcttctgttaaaggaccaacaattatattgtta
cgttcgatgagagatgggtttgaagaggaaaagaatgacgctatctacaccgactgggcc
aatcggcacctttcgaagggagctctatccaggccgattcgggatatttcgaatgaattt
cgcgattatcgactcgtctctcaacttattaatgttatagattggaagaattttgaaaaa
agtggagagaaaaatagaatttattctgatattctgaaacctgtaaccgaagggttccta
attttcaacagcatctctttttctctcttacgaacccaaaaactatcatcctatttttcg
cgcatcttgcccattccaatcaacgaatactcgcctacatacaccaaaagattggctaaa
atcacatcgaatctagatggtctcgaaacgtgcctcgactacctgaaaaacctcggtctc
gactgctcgaaactcacaaaaaccgatatcgacagtggtaacttgggagcagttcttcaa
ctcctttttcttctttcctcttacaaacagaagcttcggcaactgaaaaaggatcagaaa
aagttggaacagctcccggtaacaacaacaacgacagccatcatgccaccagcggtatcc
aatatcccatattccaggttaccatctccacgtgttcctccagcatctaatcctaattca
aattttactcaaatgtcgacgtcacgtcttcagactccacaatctcgaatatcgaaacca
gattcgacaaagattggaatcaaaccaaagacgacgtcaggactcagacctccatctacg
acgtcttctaacacaaatatcaattcatttcgtccgtcgagccgatcaagtggtaataac
aatgttggttcgacgatatccacatctgccagaagcttaggtacacacctcaacaaccta
ggatttatgcaaatttgtaatccctttctagactcctcctctgcctacagctccatatcc
aatctcagtcgtccaacgccttcatctcaaattcagaagccaacgtcgcgactacaaaca
caacaagtccgagtggcgacgactacaaagattggaagttccaagttggctgctccaaaa
gccgtcagtactccgaagcttgcatccgtcaagactatcaaaacaacgacaacggaacac
gataattctggaggaatgttgaagttgaaattgtttagcagcaagaacgcatcgtcttcg
aataacagtccacagccactcagaaaggctgagcagtccaaaatcgcggctcctgtgaaa
actggattgaagcctccgactagttcgaccaataaattgggaagcgccacatctatgtcc
aagctttgcactcccaaagtatcataccgtaagcccgatactcttcttcatacaaaatcc
gactcgaaaagatgttcgaaaagtagtgaagaagaatccggatacgctggattcaacagc
acatcgccagcgtcgtcatctacagaaggatctctcagtatgcattccacatcttccaag
agctccacatcggacgaaaagtctccgtcgtcggacgatcttactctcaacgcctccatt
gtaacagccatcagacaaccgattgcaaccagcgcagtttctccagttatcagcaaacct
gttgaggagaagccaacactcgcagtgaaaggtgttagtgcaagtaagaaagatcctcca
cctacagtacctgaacggaccaaccagccaacaattggagtcgtcagcccgattatggct
catgagaagttgccgagtgaatcgacaccttccgaaaaggtagatccgaatcctgagaag
atttcatccatgtccattgattgtgatcttccaccgccaccgactcctctgaaatccttg
gaacgagttccaccaaaaatgactccgattcgtcagccaccaacctacgatgttcttgta
aaacagggaaaaatcacatctcctgtcaagtcgttcggatatgaccaagtcgagtcgtcg
gcttcagaagactccatcgttgctcatgttcagatggcaccacctgttcagaagacgtca
gcagggcagtcgtcgatggagagaagaatccagaagaacaagacttcagaatccagcggc
tacgcttcagatgctggagtggcgatgtgtgcgaagatgcgtgagaagctgaaagagtac
gatgacatgactcgtcgtgcacagaacggctatcccgacaacttcgaagacagttcgtct
ctatcttctggcatctcagacaacaacgagctcgacgacatctcaacggacgacctgtcc
ggcatagacatggcgacagtcgcctcaaaacacagcgactattcccacttcgttcgtcat
acatcctcatcttcatctcgtccacgtgtcccgagccgcccatccacttcagtcgactct
cgttcccgagtcgaacaggagaacgtctacaaacttttatcacaatgccgcaccagccaa
cgtggagctgccactgcgacctcttcattcggtcaacattctctccgatcccctggctac
tcctcgtactctccacatctgacagtgtcagctgataaggatacaatgtcgatgcactca
caaaccagtcggagaccatcgtcccagaaaccatcttatgcaggatcctattctgctcgc
tcgcgaggtggatcgtctactggaatctatggagaaccattccagcttcaccgtctgtca
gatgagaaatcgccagctcactctgctcgtagcgaaatgggatcccagctgtctttggct
agcaccacggcatatggaacgctcaatgagaagtatgaacatgcaatcagagatatggct
cgtgatctggaatgttataaaaacacggtggattcgttgaccaagaagcaagaaaattat
ggagcactgtttgatcttttcgagcaaaaacttcgaaaactgacttcccatattgatcgg
tcaaacttgaaaccagatgaagcgacaagattccgacaggacattgctcatttgagagag
attagcaatcatctggcgacgaattcgatgcatgttaatgtgagattaaaaatggaagat
tcaggatcctcaactagacattttcaggaaggcgctggtgaacttctccgtcaaccatct
ctggaatccgttgcctctcatcgatcctccatgtcatcatcttccaagagcagcaaacaa
gagaagatcagtttgagctcatttggaaagaacaaaaagagctgggcgctttccgtagat
tctcagattcgctcgtcactgtccaaattcacaaaaaagaagaacaagaattacgatgaa
ggacacatgccatcgatatctggatcacagggaactttggacaacattgatgttattgaa
ttgagacaagagctgaaagagagggatagcgcattgtatgaagtcagattggataatctg
gatagagcaagagaggtggatgttcttaaggagactgtcaataagctcaaaaatgagaac
aagcaattgaagaaagaagttgacaaattgacaaatacctcaactacccgtgcttcttcc
cgagcctctctcccatacatccaggacgatgagcatgtttatgatcatgcatgcagttcc
acttcggccagtcaatcttccaagagatcttctggatgcaactcaatcaaagttactgtc
aatgtggatatcgctggagaaattagctccattgtgaatccggacaaggaaataattgtt
ggataccttccaatgccagccaacaattctacatggaaagatatcgatgattcgattctg
gattcattcgagaagtatctttcaaaaattgatctggaccgccagctaggtctagatgcc
aaggacgctattttcggataccagattggagagcttcgaagagtcattggagactcttca
accattatcacaagtcatccagttgatattctcactccaacgacgacaatccgaatgttc
atgtacggagcagctcaaagccgtgtcgattcaatggttctggatatgcttcttccaaga
caaatgatccttcaactcgtgaaatccatcgtcaccgaacgacgacttgttctagcagga
gctactggaatcgggaaaagcaaattggcaaaaacacttgctgcttatgtctcccttcaa
accaatcaatcagaagataaaattgtgaatatcacaattcctgaaaataacaaagaagaa
cttcttcaagtcgaacgacgtctggagaagattctgagaagcaaagaagcatgtgtcgtc
actctcgacaatattccgaagaacagaatcgcattcgttgtttccgttttcgccaacgtt
cctctccagaataacgagggaccattcgtcgtctgcacagtaaaccgctatcaaatccca
gaactcaaaactattccaaatttcaaaatgtcagtgatgtcgaatcgtttggaaggattc
attctccgttatctcagaagacgtgcagtcgaagatgaataccgtctgagtgttcaaatg
ccatcagagctctccagaatcatcgaattcttccccgtggctcttcaagcagtcaacaat
ttcatcgagaaaaccaattcggtggatgtaacagttggaccaagagcctgtttgaattgt
ccattgacaattgatggatctcgtgaatggttcatcagattgtggaatcaaaacttcatt
ccatacatggagcgtgtcgccagagatggcaaaaagaccctcggaagatgtacttccttc
gaagacccaactgacattgtcaccgaaaaatggccatggttcgatggtccaaatccagaa
gacgttctgaagcgtctccaactccaagacttggctccatcgcctgccaactcatctcgc
caacccttcaatcccctcgagtcgttgatccaattgcatgctaccaagcatcaaaccatc
gacaacttctga

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