Caenorhabditis briggsae (nematode): CBG_03070
Help
Entry
CBG_03070 CDS
T01054
Name
(RefSeq) Protein CBG03070
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04137
Mitophagy - animal
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_03070
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CBG_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_03070
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03070
04131 Membrane trafficking [BR:
cbr04131
]
CBG_03070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_03070
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CBG_03070
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CBG_03070
Membrane trafficking [BR:
cbr04131
]
SNARE
SNARE associated proteins
Others
CBG_03070
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CBG_03070
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CBG_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
TIP49
AAA_22
AAA_14
AAA_2
RNA_helicase
AAA_28
Mg_chelatase
Parvo_NS1
NPHP3_N
nSTAND3
IstB_IS21
AAA_18
ABC_tran
AAA_17
AAA_7
Vps4_C
Sigma54_activ_2
ResIII
NACHT
Viral_helicase1
ATPase_2
DUF815
TsaE
NB-ARC
UFD1_N2
Rad17
KAP_NTPase
bpMoxR
Motif
Other DBs
NCBI-GeneID:
8572780
NCBI-ProteinID:
XP_045092131
WormBase:
CBG03070
LinkDB
All DBs
Position
II:complement(7565432..7568660)
Genome browser
AA seq
865 aa
AA seq
DB search
MASVPTHQSEKEKKNDELSTAILKDKAKPNRLIVDQSEQDDNSVVSVSQAKMDELGLFRG
DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI
HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETDPAPAC
IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG
IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECE
KNQPAILFIDEIDAIAPKREKTNGEVERVLFRNFSLSWTGRSNLVVIAATNRPNSIDGAL
RRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLAEDVDLEQIANECHGFVGADLASLCSE
AALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWA
DIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA
NFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGSGAGGDAGGA
SDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQI
LKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDR
LTRGEELMEDDTVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNF
KFPGEQRGNDAPAAAGQLRMMMTCTVNYFSSSDSSMTCMILVLFLFHTHISAPLFTLFFP
PNIKPINIYCKCKANHFALETNGYG
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgttcctactcatcaaagcgagaaagaaaagaaaaacgacgagctgtctacg
gccattcttaaagataaggcgaagccaaatcgtttaattgttgatcagtccgaacaagat
gacaactcggttgtatctgtgtcccaagccaaaatggacgaacttggattattcagagga
gacgccgtaattcttaagggcaaaaagcggaaggaatctgttgccatcatcgtatctgac
gagtcttgtccaaatgagaaggttcgcatgaaccgtgttgttcgcaacaatcttcgtata
cgcctcggtgacgttgtcagcatcaccccagctccaaatctcagctatggaacccgtatt
catgttctcccaattgatgataccatcgaaggactcactggaaacctgttcgatgtgttc
ctcaagccatactttcttgaagcttatcgtcctctacacaaaggagacatctttactgtg
caggctgcaatgagaactgtcgagttcaaagtcgttgaaactgatccagcaccagcttgc
atagtttctccagatactatgatccactacgagggagatccaatcaaaagagaagaggaa
gaagagagcatgaatgacattggttacgatgatttgggaggagttcgtaagcaactcgcc
caaattaaggagatggttgagcttcctcttcgtcacccacagctgttcaaggcgatcggt
atcaaaccgccacgtggtattcttctgttcggtccaccaggaactggaaaaaccttgata
gctcgagctgtcgctaatgagacaggttcattcttcttcctcatcaatggaccagaagta
atgtcgaagatgtctggagagtccgaatccaatcttcgcaaagcttttgaagaatgcgaa
aagaatcaaccagctatccttttcatcgatgagatagatgcaattgcaccaaaacgcgag
aaaactaatggagaggtcgagcgagtattgtttcgcaacttctcactctcatggacggga
agatctaaccttgtcgtcattgctgccactaatcgtccaaactcaattgatggcgctctc
cgtcgtttcggaagattcgatcgcgaaatcgacatcggtattccagatgctgttggtcgg
cttgagatccttcgtattcacactaaaaatatgaaacttgctgaagatgtggacctggaa
caaattgctaatgagtgtcacggatttgttggtgccgatttggcatctttgtgttcagag
gcagctcttcagcaaattcgtgaaaagatggagctaatcgatctcgaagatgatcaaatc
gatgccgaagttttgaactcgctggctgtcactatggaaaacttccgttttgctcaagga
aagtcgtcaccttctgcactacgcgaagcagtggttgagacaccaaacacgacttgggct
gatatcggtggtcttcaaaatgtcaaacgcgaacttcaggaattggtgcagtatccagtt
gagcatccagagaaatatctcaagtttggcatgcagccgtctcgcggagttttgttctat
ggaccaccaggatgtggtaaaactcttcttgcgaaagcgattgcaaatgaatgccaagct
aacttcatctcgatcaaaggaccagaactgcttactatgtggttcggagagtctgaggca
aatgttcgtgatgtgttcgacaaggctcgtgccgcagctccatgtgtacttttctttgac
gaattggattcgatcgctaaagctagaggatccggagcgggaggagacgccggtggtgcc
tcagatcgcgttatcaaccaggttctcacagaaatggatggtatgaacgcaaagaagaat
gtcttcatcatcggagccaccaatagaccagacattattgatccggctgttcttcgtcct
ggacgtcttgatcaattgatctatatcccacttccggatgaagcgtctcgtctccaaatt
ttgaaggcttctctccgcaaaaccccgctttcaaaagatcttgacctgacattcctagcc
aaaaatactgttggattctctggagccgatttgactgaaatctgccagcgcgcttgcaag
ctggctattcgcgaatcgattgagaaggaaatccgaattgagaaagaacgccaagatcgt
ctcactcgcggagaagagttgatggaagacgatactgtcgatccggtcccagaaataacc
cgtgctcactttgaagaggccatgaagtttgccagacgctctgtgactgacaatgacatc
agaaaatacgagatgttcgctcaaacgcttcaacaatctcgtggattcggaaacaacttc
aagttcccaggggaacagcgtggaaacgatgcgccagcagctgctggccagctcaggatg
atgatgacctgtacagttaattatttctcttcatcggattcctcaatgacttgtatgata
cttgttttattcctcttccatacccacatttctgcacccctttttacactatttttcccc
ccaaacattaaacctatcaatatttattgtaaatgtaaagccaaccatttcgctttagaa
actaatggttacggatga
DBGET
integrated database retrieval system
