Caenorhabditis briggsae (nematode): CBG_03075
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Entry
CBG_03075 CDS
T01054
Symbol
Cbr-pro-1
Name
(RefSeq) Protein CBR-PRO-1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03075 (Cbr-pro-1)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CBG_03075 (Cbr-pro-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_Vps41
WD40_RFWD3
WD40_alt
Beta-prop_HPS5
Nbas_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8572782
NCBI-ProteinID:
XP_002631267
WormBase:
CBG03075
UniProt:
A8WSU9
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Position
II:complement(7544764..7546600)
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AA seq
532 aa
AA seq
DB search
MAYLGVDTSRIAGTQPLEMLLISSSSPDPHSTIIIDPRTGVSSWSYKGGELQGASTGLVE
PLGKDGEHIVVTTKDRPLVHVIAVHSKDRFHQKCVLPGPVSAICSDRSGRFAFMSIKRQL
YCWLLSTGELLSVIDAHYQNITKLALSDDDSMVFTASKDGAIHGYLVTELVSADRDSTVA
PFRKWASHTLAVSDLKITHGSNPRILTTGADHIACLHSISMDSVILKASADRPLTSCAID
SAETRIFIGTEVGNIAQINLFQLGAEERDLLIQAGDEHNTKFRVLNGHSDEITRLTINTD
GTLLASGDASGKYCIWEISSHQCLKVSTMRSTISTLRFIPFWPTISGGEHTKKFRPVWDL
RREPTKCERLAIEVSNEFNADQKHWNDVIEDSIDQMLLESGSTTSAQLQWQVEAPMRKQA
EVEKAEAEAMAQVITLGDDEDDAPEVGNQRRQNKKNNKKNRKLQKKLEAEQALKNKVIEE
EAELIVIDDGEESNKKILDLQASMTELREENEKLKEINRQMYEFVAAEIVDR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcttacttgggagtcgacacaagtcgaatcgccggcacacaaccgcttgagatgctt
ctgatcagcagcagtagtcccgaccctcattctacaataattatcgatccccgtaccgga
gtttcgtcgtggagttacaaaggtggagagttgcaaggagcatcaactggactcgtcgaa
cctctagggaaggatggtgaacacatcgtagtgacaacgaaagatcgtccactcgtgcat
gtgattgcagttcactcaaaagatcgatttcatcaaaaatgtgtgctccctggacctgtt
tctgccatttgtagcgatcgttctggtcgtttcgcatttatgagcattaaacgacaactt
tactgttggctgctgtctactggggaattgctttctgtcattgacgctcactatcaaaat
atcacaaaactcgctctctccgatgacgattcaatggttttcacagcctccaaagatggt
gctattcatggatatcttgttactgaactggtgtcagctgatcgagacagtactgtagcc
ccattccgtaaatgggcatctcatacattggccgtttctgatctcaaaattactcatgga
tcgaatccacgtattcttacgactggagctgaccacatcgcttgtcttcattcaatttct
atggactcagtgatcctgaaagcgtcggcagatcgtccactcacttcatgtgccatcgat
tcagcagagactcgtatattcattggaaccgaagttggaaatattgcacaaatcaacttg
ttccaactgggtgctgaagagagagatcttctgattcaagctggtgacgaacataatacg
aaattccgagttttgaatggtcactctgatgaaatcactaggcttacaattaacacagat
ggtacacttctagcttccggtgacgcatctggaaaatattgcatttgggagattagcagt
catcaatgtctcaaggtatctacaatgagatctacaattagcactctccgattcattcca
ttctggcccacgatcagtggtggtgagcacacaaaaaagttccgtccagtctgggacctc
cgcagagagccgacaaagtgtgagcgtctggcaatcgaagtctcaaacgagtttaacgct
gaccaaaagcattggaacgatgtaattgaggactcgatcgaccaaatgctcttggagtct
ggaagcacaacatcggcccaacttcaatggcaagttgaagctccaatgaggaaacaagct
gaagttgaaaaggcagaagcagaagcgatggcacaggtgataacacttggagatgatgaa
gacgatgctccggaagttggaaatcagagaagacagaataaaaagaataacaaaaagaat
agaaaacttcagaagaagttggaagctgagcaagcgttgaaaaataaggttattgaagaa
gaagctgagctgatcgtgatagatgatggagaagaatcaaacaagaaaattttggatctc
caggcaagcatgacggagttgagagaagagaatgagaagcttaaagaaattaataggcaa
atgtacgaatttgtagccgcagaaattgttgacaggtga
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