Caenorhabditis briggsae (nematode): CBG_03240
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Entry
CBG_03240 CDS
T01054
Symbol
Cbr-dep-1
Name
(RefSeq) Protein CBR-DEP-1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_03240 (Cbr-dep-1)
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
CBG_03240 (Cbr-dep-1)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
CBG_03240 (Cbr-dep-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_Dep-1_5th
Fn3_Dep-1_2nd
Fn3_Dep-1_6th
Fn3_Dep-1_1st
Fn3_Dep-1_4th
fn3
PTP_tm
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
PTP-SAK
Tc-R-P
DSPc
PTP-NADK
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
8573396
NCBI-ProteinID:
XP_045092084
WormBase:
CBG03240
LinkDB
All DBs
Position
II:6886415..6898966
Genome browser
AA seq
1385 aa
AA seq
DB search
MIRWKYGIHYLIWLLLVLHLSTCQSDSSLTTSAEQHELFAIKKDSLSPWSQILVSLPRRH
PLYQSFAAKIQDVTENISDDVRDANKTFVSSDDSPYNIRIHALKPGHRYSIAIHGQKDGS
TSLIKEESVVMDPRAPDFRSIDSDIQVAEHNITMRTIKNDSYLQDSFSIEYRQINPDKKF
PVLQILDIPEQKNLEFYLGNLNSGFDYSVRVIAHKDGISSRPWISTLTTKPSPVKAVNIN
QNSGSCVEVTWQTDEFSGADFYTIQYALQSNPSNSTNMTIPSTESSISICDSMLQGEAYQ
IVATVQKGGQVSDPLLTKFQLRPLPPIDFRVRADLKRGKYKMLAELPTSSKIDKCQITVA
GDEVERSINYANIEQTKSGHRICWFNFALSPGERFDFSISSISDESTSQKLQKSIVLTPA
FDFNAFGLTLQESNGGIELIWPKSEVFMSRVKDIWNKVVGSDSLLNMRITPIGSIDNTDK
TLKFETSPKNLDPVFAKNLVKGACYRVQLFTVTKTGIISETRHNETIRMSSPAVNVSLES
VTRSSATLRIVFATHHDSTSISNCQMHIVVRDMNGKSVFDKRMQLTSTFAPLLNLDGLRP
FHKYTVNTQIICGGGHETPQCPAATRTMRQLSFSTRQDKPAAVQNLKVEPLNSYSVMLTW
LPPAMPNGILTHYNVNVTKMGSDETRTIDVGVSSNRSDHTVQVIVDELFGGHTYNFSVRA
VTEAGFGETSPVIPSVSMPLMAPPKPTAAPMIMKESVGSHSMIVRFPTTMFDNRNGEIKQ
FAIIVSETTADDSINRWLETDNGTYTWQQVQRFDVWPSFVAKLQDIQKVKQDADVSIFEE
LGDDESCREVRADRICNGPLRSASKYRVRIRLFTSPTLFTDSPPSQVMTTAFLSPRSSAT
PAIPFVTVAIVLTVIVFAGIVGTVFLLFWNRTKKARHIFISRSNCRLAAAAFKNGPSKEK
ESQWEALKMMMAERAADCLAKLGLDATTPPPSSTTTSSNSPTSTSTTMTDCGSNPHLGAP
NANAGGHRRTRSLRERTGVEHRLERLSSGPIHRTPLYTVVSGANTNKSRPVRLEDFAEHV
RLMSADSDFRFSEEYDMMRNVGVGQSVAASELTVNRPKNRFTNIPAYDHSRVKLSNPNNI
EGGDYINANYVPGFSSRREFIAAQGPLPSTRDHFWQMTWEQQCPAIIALTKCVEKGRDKC
HQYWPDHENVPVLYGDIEVTIMAEKEYEEFVIRDIRLEKVGPEGRATRYVRHWHYMAWPD
FGAPAHPNGIIQFSRMFRHQLPHSPHNEPTIVHCSAGVGRSGTFISIDRLLQTSSLGEPI
DVFGTVCEMRYERCQMVQNEQQYIFIHYCVLQVLQGSSPSPTSSSSGAHHNAGFVQDGMM
VESGF
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctggaagtacggaattcactacctcatatggctccttctcgtgctgcatttg
tcgacgtgtcaatcagattcctctctgacgacgtcggccgagcagcacgagttgtttgcc
atcaagaaggactcgttgtctccgtggtctcaaattcttgtttcattaccacggaggcat
cctttgtatcagagttttgctgccaagattcaagatgtaactgagaatatatcggatgat
gttagagacgcgaacaaaacattcgtttcgtccgatgattctccatataacatcaggata
catgctctgaaaccaggacaccgatactcaattgctatccacggccaaaaagatggatcg
acctccttgataaaagaagaatcggttgttatggaccctcgggctcccgacttccgatca
atagattctgatatccaggtggcagagcacaacatcacaatgagaacaattaagaacgat
tcttacttacaagactctttctcaattgaatatcgtcagattaacccggataagaagttt
ccagtactccagattttggatattccggagcagaagaatttggaattttatttgggaaac
ttgaattcgggatttgactattccgttcgagtcattgctcataaagacggaattagcagt
agaccttggatttctacattaaccacaaaaccatcaccggtcaaagcagtaaacataaat
cagaattctgggtcttgtgtggaagtgacgtggcaaacggatgagttcagtggtgctgac
ttttatacaatccaatatgcactccaatcaaatccatcaaattctacaaatatgacaatc
ccttcgaccgaatcgtcgatttccatttgtgactcgatgctccaaggagaggcatatcaa
attgtggcgactgttcaaaaaggaggtcaagtttcggacccattgctcactaagttccag
ttgagaccacttccaccgattgactttcgagtacgcgcggatttaaagcgtggaaagtac
aagatgctcgcagagcttccgacgtcttctaaaatcgacaagtgtcagattactgtagct
ggagatgaagttgagagatcgatcaattatgcaaatattgaacagactaaatctggacac
agaatatgttggttcaactttgccctgtctccaggagaacgattcgacttttccatttcc
tcgatatcagatgaatccacgagtcagaagcttcaaaagagtattgttttaacacctgca
ttcgatttcaatgcattcggattgacacttcaagaatcaaatggaggtattgaattgatt
tggccgaagagtgaggtgttcatgtcgagagtcaaggatatctggaacaaagttgtcgga
tcggatagtcttctgaatatgagaataacaccaattggaagcattgataatactgataag
acattaaaatttgaaacttctccgaagaatttggatcctgtttttgccaagaatcttgtg
aaaggagcatgctatcgagtccaactgttcactgtaactaaaactggaattatctcggag
acacgacacaacgagacaatcagaatgtcgagtcccgctgtgaacgtttctttggaaagt
gtaacaaggtcatcagcaactcttcgaattgtttttgcaactcaccatgattcgacatca
atttccaactgtcaaatgcatatcgtcgtacgggatatgaacggaaaaagtgtgttcgat
aagcgaatgcaactcacttccacattcgccccacttctaaacctggacggtctgagacca
tttcacaagtatacggtaaatactcaaatcatttgtggaggtggacatgagacgccacag
tgtccagctgctacacggacaatgaggcagttatcgttttcaacgagacaggataaaccg
gccgctgtgcagaatttgaaagtcgaaccgttgaactcctactctgtgatgctcacttgg
ctaccaccagctatgccaaacggaatcctgacccattacaatgtgaatgttaccaaaatg
ggatcagacgagaccagaaccatcgatgtcggagtctcttcgaatcgatctgatcacact
gtccaagttatcgttgatgaacttttcggaggacacacctacaacttcagtgtccgagct
gtaacagaagctggatttggagaaacgtctccagtgattccaagtgtttctatgcctctg
atggcccctccaaaaccaacggcggctccgatgataatgaaagagagtgtcggaagccat
agtatgatagttagattccctacaactatgtttgataataggaatggtgaaatcaagcaa
tttgctataatagtatctgaaactacagctgacgattccataaatagatggcttgaaacg
gataacggaacttatacatggcaacaagttcaacgtttcgatgtttggccgtcctttgta
gcgaaacttcaggatatccagaaagtaaaacaagacgctgatgtgtcgattttcgaagaa
ttaggtgacgacgagagttgtcgagaggttagagcggatcgaatttgcaatggacctctc
cgatcggcatcaaagtatcgcgtcagaattcgtcttttcacttctccaacacttttcaca
gattcgccacccagtcaagtgatgaccaccgcctttctttctcctcgaagctcagcaact
cctgccatcccatttgtcactgtcgccatcgttctgacagtgatcgtgtttgctggcatc
gtcggtacggtcttccttcttttctggaatcggacaaagaaagcgagacatatttttatt
agtagatcaaattgcagactcgcagcagcggcattcaagaacggaccctcaaaagagaaa
gagtctcagtgggaggcactcaaaatgatgatggcagagagagccgccgactgccttgcc
aagctgggcctcgacgcgacgacaccgccaccgtcatcgacgacgacgagctccaactcg
ccaacgtcaacctcgacgactatgacggactgtggcagtaatccacacctcggagcaccc
aacgccaatgctggaggacaccgacgaacgaggagtctgcgggagcggacaggtgtcgag
catcgtctcgagcgtctctcgtcaggaccaattcatcgaacaccactctatacggtcgtc
agtggagccaatactaataaatcaagaccagtaagactcgaagacttcgccgagcacgtg
cgactgatgtcagcagattctgatttccgattctctgaggaatacgatatgatgcgaaac
gtgggtgttggacaatcagtcgccgcttcagaattgactgtaaatcgaccgaagaatcgt
ttcaccaacattcctgcctatgatcattcccgtgtgaagctgtcaaatccgaataatatc
gaaggaggcgactacatcaatgccaattatgttcccggattctcgtctcgtcgagagttc
attgccgcccaaggtcctttaccatcgacacgtgatcacttctggcagatgacgtgggag
cagcagtgtccagcgatcattgcattgacgaagtgtgtggaaaagggacgagataagtgt
catcagtactggccggatcatgagaatgtgcctgttttgtatggagatattgaggtaacg
ataatggctgaaaaagagtacgaagagtttgtgatccgagatattcgattggaaaaagtg
ggtccagaaggtcgagcgacccgatacgttcgtcattggcattacatggcgtggccagat
tttggagcaccagcccatccgaacggaatcattcaattctctcgaatgttccgacatcag
ctaccacattcacctcacaacgaaccaacgatagtacattgcagtgctggagttggtcgt
tctggaaccttcatcagcatcgatcgtctcctacaaactagttcacttggagagccaatc
gatgtatttggaacagtttgtgagatgcgatatgagcggtgtcagatggtgcagaatgaa
caacaatacatatttattcattattgtgttcttcaagtccttcaaggatcttctccatca
cccacgtcatcttcatcaggtgctcatcacaacgctggttttgtacaagatggaatgatg
gtcgaatcgggattctga
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integrated database retrieval system
