KEGG   Caenorhabditis briggsae (nematode): CBG_03561
Entry
CBG_03561         CDS       T01054                                 
Symbol
Cbr-taf-7.2
Name
(RefSeq) Protein CBR-TAF-7.2
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CBG_03561 (Cbr-taf-7.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_03561 (Cbr-taf-7.2)
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_03561 (Cbr-taf-7.2)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CBG_03561 (Cbr-taf-7.2)
   Coactivators
    SAGA/TFTC/STAGA complex
     CBG_03561 (Cbr-taf-7.2)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     CBG_03561 (Cbr-taf-7.2)
SSDB
Motif
Pfam: TAFII55_N CHIP_TPR_N
Other DBs
NCBI-GeneID: 8589042
NCBI-ProteinID: XP_045092427
WormBase: CBG03561
LinkDB
Position
III:complement(10895095..10895930)
AA seq 245 aa
MSLASGTRIPLKRGPKPQVFEEAPITTPTDDPPEFESHIVLRVPEDCVDRIEKIIETDGK
VEDFAINLNSDARNSTLRIGNRLLNGKILDLPTITEVHKTLDDKSLYKVADVSQILVCTH
DSINAITPSALSDVTEDPQAAAKKAAKQWQYPHGLTPPMKCARKKRFRKTKKKKLMDAPE
VETELKRLLRADLEADSVRWEIVEGGAEDGGGVDEGVARTQGHVNYPSSSDEESDPMADD
DEKEE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtcgttggcatcgggcaccagaattccgctgaaaagaggtccgaaaccccaagtattc
gaagaagcgccaatcacaacaccaaccgatgatccaccagagttcgaatctcacatcgtc
cttcgtgttccagaagattgtgtagatcgcatcgaaaaaatcattgaaacagatggaaag
gttgaagatttcgctataaatctaaacagcgacgctcgcaactccacacttcgtatcggg
aatcgactattgaatggaaagattttagacttgcctacaatcacggaggtccacaaaacg
ttggatgacaagagtctttataaagttgccgatgtctcgcagattctagtttgtacccat
gattcgatcaatgcgattacgccttcagctctctccgatgtcacagaagatcctcaagcg
gccgcaaagaaggctgcaaagcaatggcaatatccacatggcctaacccctcccatgaaa
tgtgcccgaaagaagagatttcgaaagactaaaaagaagaaactgatggatgcgccagag
gtggaaacagagcttaaacgtcttctgagggcagatttggaggcggatagtgtcagatgg
gaaatcgtagaagggggagcagaagatggtggtggtgtagacgaaggcgtcgcacggact
cagggacatgtcaattatccatcgagcagcgatgaggaatcagatccgatggctgatgat
gatgagaaagaagagtga

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