KEGG   Caenorhabditis briggsae (nematode): CBG_03562
Entry
CBG_03562         CDS       T01054                                 
Symbol
Cbr-elpc-2
Name
(RefSeq) Protein CBR-ELPC-2
  KO
K11374  elongator complex protein 2
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_03562 (Cbr-elpc-2)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    CBG_03562 (Cbr-elpc-2)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR35_TULP_N Mcl1_mid BrxE NBCH_WD40
Other DBs
NCBI-GeneID: 8589043
NCBI-ProteinID: XP_045092428
WormBase: CBG03562
LinkDB
Position
III:<10896552..>10899628
AA seq 766 aa
MKIKEEFISASVNPRSHCLVACKSAPLVVYASSLQIAVQTIPNNDSEVGVIRSTSERRHQ
KPIAVLKRLKSAANVDEFVSGDVGSRVVLWKLNGEKVEYVADLSGCSGSVGSVCGVVESN
RKVVAASWVQYPNNGFEAWWTTSSGDLVHSRKIDLDQKAFALCLDAISLQNTVLLAVGTS
KRFVELYGESDDKKTFKRLVSVAGHTDWIHSIAFNDNPFHLLVASAGQDTYVRLWSIEPE
SGPHHEAPKIPAAEEDVLDELTSSANLFQFNNSSYRCSSHAVMQGHDDWVHSTVWSENGR
VLLTASSDKTCIIWREIDNLWRDDVRLGIVGGQAAGFFSAVFLNSHKNHSDSDSEDVVAS
SSYFGGLHAWKSSDEQRTFWTSLPMTGGHVGEVRDVDWHESSFLISVGQDQTTRVFAKSE
KQQVYLEMARPQVHGHDMQCLSFVNPSVFVSGAEEKVFRAFRAPKSFVKSLETLTGVPSS
KSFGSSRIAEFGACVPALGLSNKPMIEGETVDGEHWEEDAFRAAPTVLETAPTEDTLQQN
TLWPEDHKLYGHGYEVYAVTANPRGTVLATACKSSHVEHSVVMLWKTEDWSKQAEIVGHQ
LTVTQIAWNPSGTVLLTVSRDRTAKLYKEKTGNLDGFAYECVWTSGKQHTRIIWGCDWLD
DQRFVTAARDQKVIVWHSEGTPKAQIKLDEPVTAVAASGDVIAAGLQTGELVILRVNGEN
LEIVEKVGTNPIPIDAAILRLRFSKCGKKLAVATSDAKLRVFEISE
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgaaaatcaaagaggagttcatctcagctagtgttaatccacgctctcactgcctggtg
gcctgtaaatccgcccctctggtcgtctacgcttcctcacttcaaatcgcggttcagact
attcctaataatgattcagaagttggagtaattcgaagcacatccgagcgacgtcatcag
aagccgattgcagtgctaaaacggctcaagtcagcggctaacgtcgatgagtttgtatca
ggagacgtcggatcgcgagtggttttgtggaaattgaatggagagaaagtagaatacgtg
gcagatctctctgggtgttctggaagtgtcggaagtgtttgtggagttgtcgagagcaat
aggaaggttgtagcggcttcttgggtccaatacccaaataacggattcgaagcatggtgg
acaacatcatctggagatctagtgcattctaggaaaatcgatctggatcagaaggccttt
gccctttgcctagacgctatttcccttcaaaacacagttttattggcggtaggaacgtcg
aaacgattcgtggagctttatggagaatcagatgataagaagacgttcaaacgactagtt
tcagtggcaggacacactgattggattcactcgattgcctttaacgataacccattccat
cttctagttgcctctgctggtcaggacacctacgtccggctctggtcaattgaaccagaa
tccggacctcatcatgaagccccgaagattccagcagcagaagaggatgttctagatgag
ctgacgtcttctgcaaacctcttccaattcaacaactcctcctatcgatgcagctctcat
gccgtaatgcagggacatgatgattgggtgcattcgacggtgtggagtgagaatgggcgg
gttttgttgacggcttctagtgacaagacgtgtattatctggagggaaatcgataattta
tggagagacgatgtcagattgggaattgttggaggacaagcggctggattcttttcggct
gtgtttttgaattcacataaaaatcattccgattcggattctgaagatgtcgtcgccagc
tcttcttacttcggtggccttcacgcgtggaagtcttctgatgagcagcgaacattctgg
acgtctcttccgatgaccggtggtcatgtcggagaggttcgtgacgtggattggcatgaa
tcgtcgtttttgatatcagttggacaggatcagacgactcgggtgtttgcgaaaagtgag
aaacagcaagtctatctggaaatggctcgtccacaagtccacggccacgatatgcagtgt
ctctctttcgtcaatccatcggtattcgtctctggcgctgaggagaaagtcttcagagct
tttcgagctccaaaatcgtttgttaaaagtcttgaaactctcactggagtcccctcctca
aaatcattcggatccagtcgaatcgccgagtttggagcgtgcgttccagctttaggactc
tctaacaaaccaatgatcgaaggagaaactgtggatggagagcattgggaggaggatgcg
ttcagagcagcaccaactgtgctagaaaccgcaccaactgaggatacccttcaacagaac
actctttggccggaagatcataaactgtatggtcatggttatgaggtttatgcagttact
gcgaatccacggggtactgtattggctactgcttgcaagtctagccacgtggaacactcg
gttgtcatgctttggaaaactgaagattggtctaagcaagcggaaattgttggacatcag
ttgacggttactcaaatcgcttggaatccttctggaactgtgttgttgactgttagcaga
gatcgaactgcaaagctttataaagagaagactgggaatttggatggatttgcgtatgaa
tgcgtttggacatctggaaagcagcacactcgtattatttggggttgtgattggcttgat
gaccagcgatttgtgactgctgccagagatcaaaaagttattgtatggcattctgaaggg
acaccaaaagctcaaatcaaacttgatgagcctgtgactgctgtggccgctagtggagac
gtgatcgctgcgggtcttcaaactggagaacttgttatactccgagtaaacggagaaaat
ctggagattgtcgaaaaagttggaaccaatccgatcccgattgatgctgccattttacgc
ctacgtttttcaaagtgtggaaagaagttggcagtcgccactagcgatgccaaattacga
gtttttgaaatcagtgaatag

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