Caenorhabditis briggsae (nematode): CBG_03563
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Entry
CBG_03563 CDS
T01054
Symbol
Cbr-rsp-3
Name
(RefSeq) Protein CBR-RSP-3
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_03563 (Cbr-rsp-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_03563 (Cbr-rsp-3)
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
SR proteins
CBG_03563 (Cbr-rsp-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_PARP14_3
Nup35_RRM_2
GRP
Motif
Other DBs
NCBI-GeneID:
8589044
NCBI-ProteinID:
XP_045092429
WormBase:
CBG03563
LinkDB
All DBs
Position
III:complement(<10900574..>10901451)
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AA seq
258 aa
AA seq
DB search
MPRGGEDQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAED
AVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPINEEGGGYRGGGDYRGGRGGRQGGPQRR
TGYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARDGTGVVEFTRYDDVKYAIRKLDDT
KFRSHEGETAYIRVREDNSSAGGSGGGGRDRDRSRSRSPRAERRASPKYSPRRSRSRSRS
RSRSRSVSRSPSRSPSPQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaggtggagaggatcaaaaagtctacgttggcaacctgccagctgatgtccgt
gacaaggaggtcgaagacatcttccataagtacgggcgcatcaagtacatcgacgtcaaa
tccggacgcggaccagcattcgcttttatcgagttcgaggacaacagagatgcagaggat
gcagtccgcgctcgtgacggctacgagttcgatggacgccgtattcgcgtcgagttcact
cgtggagtcggaccacgaggaccaggcggtcgcccaatcaacgaggaaggaggtggctac
cgtggaggcggtgactatcgtggaggacgtggtggtcgtcaaggtggaccacaaagaaga
actggataccgcgtcattgttgaaggacttccaccaaccggatcgtggcaggatctgaaa
gaccacatgcgtgaggctggagacgtctgctatgccgatgttgctcgcgacggaaccgga
gtagttgagttcactcgctacgacgacgtcaagtacgctattcgtaagttggacgacacc
aagttccgatcccatgagggagaaactgcatacattcgtgttcgcgaggacaactcatct
gccggaggaagcggaggtggtggtcgtgatcgtgatcgcagccgctctcgctcaccacgt
gccgagcgtcgtgcttcgccaaagtactctccacgtcgttctcgctcccgtagccgttcc
cgctctcgctctcgttcggtttctcgcagcccatcccgctcgccgtctccacaataa
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