Caenorhabditis briggsae (nematode): CBG_03634
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Entry
CBG_03634 CDS
T01054
Name
(RefSeq) Protein CBG03634
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_03634
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CBG_03634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
8589094
NCBI-ProteinID:
XP_002647095
WormBase:
CBG03634
UniProt:
A0AAE9DEG2
A8WVH5
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Position
III:11232139..11237144
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AA seq
648 aa
AA seq
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MKRNTASAPHLSPRRDDDVKKPKIEKEEDKPASAAPTGREIISNYLNGDVTAAVLYRKIC
NALETFEQWELEAPKLQILEQFLGCADVMEARTDDLVKRLLALRWDKIPQSAIERFRTFL
CELAIRHLCFTEHVYTAVVQRLVPQVSSDESTGIVSFVLTEEKQNEHFEMAHIILSSVIR
CFPLSAKSLLKCLRKAMPHFTQPPVAVSGYMRNLMLMQKYVPLSITKDVWETIFERLAKD
DAHNWRCEQNEEESKSPRLFALNDDILIEDVIETTNDSEDVTPKLLEQRKGEQTMQYLDA
VCTDVIAFIRHSEGVDAQENEEKGQKIEEKWLRTFKIKGDKVLAPENLFDTFLEVLESTM
LNATHVQYVSFIWLYFGSLKEEYEQKVLEHLWQVTIRMPRAPADSKKSQGAAAYLAAFLA
RAKYVKKDVAFTWLEEIYTWLKRYVVQFGSGSSQILPGLHRHGTFYAISQAFFLVFSFRY
KEFAKNQEILEAMRRWGVGRIVHSPLEPLRYVSKPVARCFSAITRSLQLVYCNHVIPIED
VQRPFEDMFPFDGFHLKVSSQFITPLMRKFSPLAEDMTTLTKALCWNTAGGDKSDKMTEA
TSSSEGLDFLDEEDVVLSSGGFRERTFSCGQSSLINYSATPGLKSFNV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaatactgctagtgctccgcatttgtcgccgaggcgtgatgatgatgtgaaa
aagccaaaaatcgaaaaagaagaggacaagccagcatctgcagccccaaccggcagagaa
atcataagcaattatctgaatggcgatgtcaccgctgcggtcctctacagaaaaatctgc
aatgcgttggaaactttcgagcaatgggagctggaagccccaaaactacaaattctagag
caatttttaggatgtgccgatgttatggaagctagaaccgacgatttggtcaaacgactt
ttggcacttcgctgggataaaattccacaatcggctatcgagagattccgcacttttctt
tgcgagttggcgattcgacacctttgttttacggagcatgtttatacggcggtggtgcaa
cgtttagttccacaggtttcatctgacgaatcgacgggaattgtgagctttgtgttgacg
gaggagaagcaaaatgagcactttgaaatggctcatattattctttccagtgttattcgc
tgcttcccattatccgccaaatcgctcttaaaatgcctccgcaaggcgatgccacacttc
actcaaccgcctgtcgccgtttcgggatacatgagaaatttgatgttgatgcagaaatat
gtgccattaagtatcacaaaggatgtctgggagacgattttcgagaggttggctaaggat
gatgcgcacaactggcgatgcgagcagaacgaagaagaaagcaagagcccccgtttgttc
gcgctcaacgacgatattctgattgaagacgtcatcgaaaccaccaacgattctgaagac
gtcacgccgaaacttctggagcaacgtaaaggagagcagacgatgcagtacctggacgcc
gtctgcaccgacgtcatcgcattcatcaggcattcagaaggcgttgatgctcaggaaaac
gaggaaaaaggccagaaaatcgaggagaaatggttgagaacgttcaaaatcaaaggagac
aaagtgctggcccccgagaatttgttcgacacatttttggaggttttggagtccacgatg
ctcaatgctactcatgttcaatatgtgtccttcatctggttatatttcggatcgttgaaa
gaagaatacgagcagaaagttctcgaacatctctggcaagtgaccataagaatgccgaga
gcaccggcggattcgaagaaaagtcaaggagccgcggcgtatttggcagcgtttttggct
agagccaaatatgtgaaaaaggatgtcgccttcacctggctcgaggaaatctacacgtgg
ctcaagcgctacgttgttcaattcggctccggaagctcacagatccttccaggcctccat
cgacacggaaccttctacgctatctcgcaggcgttcttcttggtcttctcgttccgatac
aaagagtttgccaagaatcaggaaattctggaagcaatgcgtcgttggggagtcggccgt
atcgttcattcgccactagagccattgagatacgtgtcgaagccggtggccagatgcttc
tcggctattacaagatcgctgcaattggtgtactgtaaccacgtgattccgattgaagac
gtccagcgaccattcgaagacatgtttccgtttgatgggttccatttgaaagtaagcagt
caattcatcactccattaatgcgaaagttctcgccacttgctgaggatatgaccactttg
accaaagcgttgtgctggaatacggctggtggtgataagtcggataagatgaccgaggcg
acatcaagttcagaaggtctagattttctggatgaggaggatgtcgtgttgagttcagga
ggattccgtgagcgcaccttctcatgtggccaaagttcccttatcaactactctgcaaca
ccgggactcaagagtttcaacgtctaa
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