Caenorhabditis briggsae (nematode): CBG_03654
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Entry
CBG_03654 CDS
T01054
Name
(RefSeq) Protein CBG03654
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBG_03654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_03654
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CBG_03654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
8572976
NCBI-ProteinID:
XP_002629936
WormBase:
CBG03654
UniProt:
A8WVI8
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Position
II:complement(2255729..2261928)
Genome browser
AA seq
483 aa
AA seq
DB search
MTSKPEDVKSEINVRVAKRNDAVRYSVMSFNGMDKVDTSKWTMESGVTMEREDNQRVVMA
TQSVQEYGEGSEYGKAAREEARRKKFGRQSKSYKLDNQPWKLSFKEPEGRQRQMRGIREG
GANEHADYWVFMKPPGNFSEFKAYKVDEWHKFLPAITHKTLDIDQAEEQFSQRNKVMNQF
ALKAAIQNQLNAADEVEMSEQQKRLLKIKDEGSSDDSDDGDDEGEGGGEDGKKNNGKNKK
KKKKNVKPAKEKRQRVENSDDVAKYESSDGEDEGREYDYISDSGTDSDREQVPSDEKIEK
QLVGVAEEEGARKLFDTDSSESDDDLAKKLLNKDDKRKGGNDVEERDSSGSDSDDPDTEK
IESVVFLKANKDAEGSSSGGGKKRPLTEDSDVKVDGGSDAKKPKTAAKFEEGLNEETVRR
YLRRKPHTTKELLHKMNGKCGEMSKSEMVMKLATILKAIEPHQTRQLKGKKEVLFFSLAN
TVA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaaaccagaagacgtcaaaagcgaaatcaacgttcgtgtggcgaaacgaaac
gacgcggtacggtactcggtgatgagtttcaacggaatggacaaggtcgacacatcgaaa
tggacgatggagagcggggtgacgatggagcgagaggataatcagagagtcgtcatggcg
acacagtcggttcaggaatacggagaaggctcggagtacggtaaagcggcacgcgaagag
gcacgccgcaagaagttcggtcgccaatcgaaaagctacaaattggacaatcaaccatgg
aaactgtcattcaaagagcccgaaggccgtcaacgacaaatgcgcggaatccgagagggc
ggagccaacgagcacgccgactattgggtcttcatgaagccgccgggcaatttcagcgaa
ttcaaggcgtataaagtcgatgaatggcataaattcttgccggcaatcactcataaaacg
ctggatatcgatcaggctgaggagcagttctcgcagaggaataaggttatgaaccagttc
gcactgaaagcggctatacagaatcagctgaatgcggcggatgaggtggagatgtccgag
caacagaagagactgctgaagattaaggacgaaggaagctcggacgattcagatgacggt
gacgatgaaggagaaggtggtggtgaggatggaaagaagaataacggaaagaataagaag
aagaagaagaagaatgtgaagccggcgaaggagaagcgacagagagtcgagaatagtgac
gatgtggctaaatacgagtcatctgacggcgaggatgagggacgcgagtacgactacatt
tcggacagtggaaccgattctgaccgcgaacaagtcccatccgacgagaaaatcgagaag
caactcgtcggcgtcgccgaggaggagggcgctcgtaagctgttcgacacggattccagc
gagtcggacgacgacttggccaaaaaattgctgaacaaagacgacaaacgaaaaggaggg
aacgatgtcgaggagcgcgactcgtcgggatcggattccgacgatccggacaccgagaaa
attgaatctgtggtgtttttgaaggcgaacaaggatgcggagggaagctcgtcgggagga
ggcaagaaacgaccgttgacagaggattcagatgtgaaagtggacgggggaagtgatgcc
aaaaagccgaaaactgctgcgaaattcgaggaggggcttaacgaggagactgtgagaaga
tatcttcgtcgcaaaccacataccaccaaggaactgctccacaagatgaacggaaaatgc
ggtgaaatgagcaaatcggagatggtgatgaagttggcgacgatcctcaaagccatcgaa
ccccatcaaacacggcagctgaagggcaagaaggaggtgctgttcttctcgttggccaac
actgtcgcttga
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integrated database retrieval system