Caenorhabditis briggsae (nematode): CBG_03683
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Entry
CBG_03683 CDS
T01054
Name
(RefSeq) Protein CBG03683
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03683
04121 Ubiquitin system [BR:
cbr04121
]
CBG_03683
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
90S particles
Other 90S particles
CBG_03683
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CBG_03683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
8573092
NCBI-ProteinID:
XP_045092461
WormBase:
CBG03683
UniProt:
A8WVL1
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All DBs
Position
II:complement(2452039..2457088)
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AA seq
498 aa
AA seq
DB search
MKIKVISRNPNTYQRETVDKRNKIVRNFNTPADPFRAQTEYTRALNATKLERVFAKPFVA
SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISVDNN
NGENFVTVGQDAQLKYWKISSVVESQQKTPAHSIAIDGIVYGVSHLSFSSDFVTCGEDIS
VWKPFRETPLRSYNLGTDTIHACRANPIEENVIVGCRSDRSIFVLDTRQDVPLKKVTMKM
RPNKVSWNPMEAYSFTVASEDFSPKSFKNCSGTAQKWFLVNFQLFGSNFEAISPKPPQKL
LWNSLEMLQKTANLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQEFVAAGYDRSIRLF
KARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGSNEMNIRVWKANAAEKLGPLTKREKQ
AFAYNEKLRETYKNHPDVRRIAKHRNVPRHIFTAAKEHKLIRDARARRDLRRAKAQGLDE
EESYLPQTQKVMLGDAEM
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaagtaatttctcgtaatccaaacacctatcaaagggagacagtcgataaa
aggaataaaattgtccgcaacttcaacacaccggcagatccgttccgtgcacaaaccgag
tacactcgcgcgttgaatgccacaaagctcgagcgagttttcgcgaaaccgttcgtcgcc
agtctcgatggacatgttgatggtgttcaagtgctcgcaaaacatccaaaccgcccatct
acggtattctctggcgcccgcgatggccaggtaaaaatctggaatctggcgtcccgtgaa
tgtcaagccaccctagacgcccatcgtggcctcgtcaacgacatctcagtggataataat
aacggagagaacttcgtcaccgtcgggcaggatgcacagttaaagtactggaaaatcagc
tcagtggtcgagtcccaacagaaaacccccgctcattcgattgcaatcgatggaatcgtc
tatggagtctcccatttatcattttcatccgatttcgtcacttgtggagaggatatcagt
gtttggaagccgttccgagagacaccactgcgaagttataaccttggaaccgacacgatt
catgcgtgccgagcaaatccgattgaggagaatgtgatcgttggctgtagatcggatcga
tcgatttttgtgttggatacgagacaggatgtgcctttaaagaaggttactatgaaaatg
aggccgaataaagtgtcgtggaacccaatggaagcctattcgttcacggtggctagtgag
gattttagcccaaaatccttcaaaaactgctcaggaactgctcagaaatggtttctggtc
aattttcaactttttggttctaattttgaagcgatttcacccaaaccccctcaaaaactg
ctctggaactctttagaaatgctccaaaaaactgcaaatctctacacattcgacatgcgt
tatatggagcatccagtacagtcccatcaaggatttacatcggccgttttggatgtggac
tactcgccgacgggacaggaattcgttgctgctggctatgatagatcgattcgattgttc
aaggcgagagatatgacgagcagagacgtctactacacgaaacgaatggcctccgtccta
tccgtcctctggtcggcagattcgaaattcgtgttatccggatccaacgaaatgaatatt
cgcgtgtggaaagcgaacgccgcagagaagctgggaccattgacaaagcgagagaaacaa
gcgtttgcgtacaatgaaaagctccgtgagacgtacaaaaaccatccggacgtcagacga
atcgccaagcatcgtaatgtgccaagacatattttcacagccgccaaagagcacaaactc
atccgtgacgcccgagctcgtcgtgatcttcgccgtgccaaggctcaaggactcgacgag
gaggaatcgtatctgccacaaacacaaaaagtcatgttgggcgatgcggaaatgtga
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