KEGG   Caenorhabditis briggsae (nematode): CBG_03683
Entry
CBG_03683         CDS       T01054                                 
Name
(RefSeq) Protein CBG03683
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbr03009]
    CBG_03683
   04121 Ubiquitin system [BR:cbr04121]
    CBG_03683
Ribosome biogenesis [BR:cbr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CBG_03683
Ubiquitin system [BR:cbr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CBG_03683
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 8573092
NCBI-ProteinID: XP_045092461
WormBase: CBG03683
UniProt: A8WVL1
LinkDB
Position
II:complement(2452039..2457088)
AA seq 498 aa
MKIKVISRNPNTYQRETVDKRNKIVRNFNTPADPFRAQTEYTRALNATKLERVFAKPFVA
SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISVDNN
NGENFVTVGQDAQLKYWKISSVVESQQKTPAHSIAIDGIVYGVSHLSFSSDFVTCGEDIS
VWKPFRETPLRSYNLGTDTIHACRANPIEENVIVGCRSDRSIFVLDTRQDVPLKKVTMKM
RPNKVSWNPMEAYSFTVASEDFSPKSFKNCSGTAQKWFLVNFQLFGSNFEAISPKPPQKL
LWNSLEMLQKTANLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQEFVAAGYDRSIRLF
KARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGSNEMNIRVWKANAAEKLGPLTKREKQ
AFAYNEKLRETYKNHPDVRRIAKHRNVPRHIFTAAKEHKLIRDARARRDLRRAKAQGLDE
EESYLPQTQKVMLGDAEM
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaaaatcaaagtaatttctcgtaatccaaacacctatcaaagggagacagtcgataaa
aggaataaaattgtccgcaacttcaacacaccggcagatccgttccgtgcacaaaccgag
tacactcgcgcgttgaatgccacaaagctcgagcgagttttcgcgaaaccgttcgtcgcc
agtctcgatggacatgttgatggtgttcaagtgctcgcaaaacatccaaaccgcccatct
acggtattctctggcgcccgcgatggccaggtaaaaatctggaatctggcgtcccgtgaa
tgtcaagccaccctagacgcccatcgtggcctcgtcaacgacatctcagtggataataat
aacggagagaacttcgtcaccgtcgggcaggatgcacagttaaagtactggaaaatcagc
tcagtggtcgagtcccaacagaaaacccccgctcattcgattgcaatcgatggaatcgtc
tatggagtctcccatttatcattttcatccgatttcgtcacttgtggagaggatatcagt
gtttggaagccgttccgagagacaccactgcgaagttataaccttggaaccgacacgatt
catgcgtgccgagcaaatccgattgaggagaatgtgatcgttggctgtagatcggatcga
tcgatttttgtgttggatacgagacaggatgtgcctttaaagaaggttactatgaaaatg
aggccgaataaagtgtcgtggaacccaatggaagcctattcgttcacggtggctagtgag
gattttagcccaaaatccttcaaaaactgctcaggaactgctcagaaatggtttctggtc
aattttcaactttttggttctaattttgaagcgatttcacccaaaccccctcaaaaactg
ctctggaactctttagaaatgctccaaaaaactgcaaatctctacacattcgacatgcgt
tatatggagcatccagtacagtcccatcaaggatttacatcggccgttttggatgtggac
tactcgccgacgggacaggaattcgttgctgctggctatgatagatcgattcgattgttc
aaggcgagagatatgacgagcagagacgtctactacacgaaacgaatggcctccgtccta
tccgtcctctggtcggcagattcgaaattcgtgttatccggatccaacgaaatgaatatt
cgcgtgtggaaagcgaacgccgcagagaagctgggaccattgacaaagcgagagaaacaa
gcgtttgcgtacaatgaaaagctccgtgagacgtacaaaaaccatccggacgtcagacga
atcgccaagcatcgtaatgtgccaagacatattttcacagccgccaaagagcacaaactc
atccgtgacgcccgagctcgtcgtgatcttcgccgtgccaaggctcaaggactcgacgag
gaggaatcgtatctgccacaaacacaaaaagtcatgttgggcgatgcggaaatgtga

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