Caenorhabditis briggsae (nematode): CBG_03710
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Entry
CBG_03710 CDS
T01054
Symbol
Cbr-lin-53
Name
(RefSeq) Protein CBR-LIN-53
KO
K10752
histone-binding protein RBBP4
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
cbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_03710 (Cbr-lin-53)
03083 Polycomb repressive complex
CBG_03710 (Cbr-lin-53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_03710 (Cbr-lin-53)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CBG_03710 (Cbr-lin-53)
Histone modification proteins
HAT complexes
HATB complex
CBG_03710 (Cbr-lin-53)
HDAC complexes
Sin3A-HDAC complex
CBG_03710 (Cbr-lin-53)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CBG_03710 (Cbr-lin-53)
PRC2.2
CBG_03710 (Cbr-lin-53)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CBG_03710 (Cbr-lin-53)
Heterochromatin formation proteins
Other heterochromatin formation proteins
CBG_03710 (Cbr-lin-53)
Chromatin remodeling factors
NuRD complex
CBG_03710 (Cbr-lin-53)
NuRF complex
CBG_03710 (Cbr-lin-53)
NuRF complex (fruit fly)
CBG_03710 (Cbr-lin-53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
DUF6128
Motif
Other DBs
NCBI-GeneID:
68916498
NCBI-ProteinID:
XP_045092470
WormBase:
CBG03710
LinkDB
All DBs
Position
I:5644514..5645855
Genome browser
AA seq
416 aa
AA seq
DB search
MATIEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVH
RLILGTHTSDEQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHE
GEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSW
NPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGS
VGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRL
KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLF
IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNDVEDETPADMVERS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatagaggatggtacctcggaggatcgtgtggccaatgatgaatacaaaatt
tggaagaaaaacactccgtttttgtatgatctcgttatgacgcacgcactcgaatggcca
tcgttgagcgtgcaatggcttccagaaatcgaaaaggaaagtagcgaccatactgttcat
agacttattctcggaacgcatacatcagatgagcaaaaccatcttttgatttcaaaaatc
tgcatgccaacagatgaagcgcaatttgatgcgtctcgttacgacaccgaacgcggtgag
ttcggaggtttcggagctgtgaacggaaaggttgaacctgatattcgtatcaatcacgag
ggagaagttaaccgtgctcgctacatgcctcaaaagccaaccattattgccacaaaatct
ccatctgccgatgtctatatcttcgattatacaaagtacccatctgttccaaaggacaac
actttcaatcctctgctcaaactcaaaggacatactaaagagggatacggattgtcatgg
aacccgaataaagaaggtctgattctttccgcttcagacgaccagactgtatgtcactgg
gatattaacggaaacgctggggcaaacggcgaattgaaagcgagagaaatcttcaagggg
cacgaatctgtcgttgaagacgttgcgtggcatgttttgcacgacggagtttttggttcg
gtcggagatgacaagaaattgctcatttgggatctgcgaaccaacgttccaggacatgca
atcgatgctcattcagccgaagttaattgccttgccttcaatccatactccgaattcata
ctagccactggttcagccgataaaactgtcgcgctttgggatctcaggaatctccgtctc
aagttacattcgttcgaatctcatcgcgacgaaatcttccaagttcaatggagcccgcat
aatgagaccatcctcgcatccagcggaactgacaaacgacttcatgtttgggacctgtcc
aaaatcggagaagatcaaactgctgaggatgctgaggatggaccacctgagctcctcttc
atccatggtgggcacactgccaaaatcagcgatttctcatggaaccctaacgaaccatgg
gtggtttgcagtgtttcggaagataacattttgcaagtttggcagatggctgacaacatt
tacaacgatgtcgaagacgaaactcccgccgatatggttgagcggtcttaa
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integrated database retrieval system