Caenorhabditis briggsae (nematode): CBG_03711
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Entry
CBG_03711 CDS
T01054
Symbol
Cbr-rba-1
Name
(RefSeq) Protein CBR-RBA-1
KO
K10752
histone-binding protein RBBP4
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
cbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_03711 (Cbr-rba-1)
03083 Polycomb repressive complex
CBG_03711 (Cbr-rba-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_03711 (Cbr-rba-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CBG_03711 (Cbr-rba-1)
Histone modification proteins
HAT complexes
HATB complex
CBG_03711 (Cbr-rba-1)
HDAC complexes
Sin3A-HDAC complex
CBG_03711 (Cbr-rba-1)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CBG_03711 (Cbr-rba-1)
PRC2.2
CBG_03711 (Cbr-rba-1)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CBG_03711 (Cbr-rba-1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
CBG_03711 (Cbr-rba-1)
Chromatin remodeling factors
NuRD complex
CBG_03711 (Cbr-rba-1)
NuRF complex
CBG_03711 (Cbr-rba-1)
NuRF complex (fruit fly)
CBG_03711 (Cbr-rba-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_HPS5
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_RFWD3
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
CNH
Ferritin
Motif
Other DBs
NCBI-GeneID:
8581166
NCBI-ProteinID:
XP_002639172
WormBase:
CBG03711
UniProt:
A8WWI7
A0AAE9DS27
LinkDB
All DBs
Position
I:5646134..5647575
Genome browser
AA seq
418 aa
AA seq
DB search
MSEAGSCEELTREQRVWKKNVPYLYDTMVTKELEWPSLTIQWMPDVTKTENSDSSVHRLI
HGTHTSGDVQNHLIISKFSINTDGPEFDDSKWDPEREEYGGYGAGSAAKLEGEIRINHPG
EVHRARYMPQNPYVVATRGPFDDVFIIDYTKHPSTPQDSTFRPQLRLKGHEGEGYGMSWS
NTREGHLLTAGDDGAVCHWDINANQKISGQLNQQSKYKGHSSNVEDVSFHQLHDFVFASV
GDDRKLNLWDLRHPKPQLSSIGHNAEVNCVAFNPFSEFILATGSADKTVALWDMRNLGKK
VYTLQHHENEIFQVSFSPHFETVLASSGSDDRVIVWDLSKIEDPSSNSSKISSSPPPEVL
FVHAGHVGKVADFSWNSNRPWTICSSDEFNKLQVWEISENIINIQNIKNEADIKSETE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggccggctcctgcgaagaattaacccgggaacagcgagtatggaagaaaaat
gttccgtatctatatgacacaatggtcacaaaagaactcgaatggccatcgttaaccatt
cagtggatgcctgacgtgactaaaacagaaaactctgattcatcggtacatcgattaatt
catggaacacacacttcgggtgatgttcaaaatcatttgattatctcaaagttttctatc
aatacggatggacccgaattcgatgactcgaaatgggatcctgaacgggaagagtatggc
ggatacggagcgggaagtgctgcaaagctggaaggtgagattcgtatcaatcacccagga
gaagtgcatcgggcgcggtacatgcctcagaatccatatgtagttgctaccagaggtccc
tttgatgatgtgttcatcatcgattatactaagcatccatccacaccccaggatagtact
tttcgaccgcaactacggctgaaaggacacgagggagaagggtatggtatgtcgtggagc
aatacaagagaaggacacttgctcaccgcaggtgacgatggagctgtttgtcattgggac
ataaatgcaaatcaaaagattagtggacaattgaatcaacagagtaaatataaaggacat
tcatcgaacgttgaagatgtatcctttcaccagcttcatgatttcgttttcgcatcagtc
ggagatgatagaaaattgaatctctgggatcttcgtcacccaaaacctcaactttcttcg
atcggacataacgccgaagtcaattgcgtcgctttcaatcctttttctgagttcattctt
gccaccggttcggccgataagacagtagctttgtgggatatgagaaatcttggaaagaag
gtttacactcttcaacatcacgaaaatgagattttccaagtttcattcagtccacatttc
gaaactgttcttgctagcagtgggtccgatgatcgagtcattgtatgggatctttcgaag
attgaagacccgtcatcaaattcttctaaaatttcttcgtctccaccaccggaagtgttg
ttcgttcatgctggacatgttggaaaggtagctgatttctcgtggaactcgaatcgccca
tggaccatttgtagcagtgacgaattcaataaattgcaggtatgggaaatctcggaaaat
atcataaatatccagaatatcaagaatgaagcagatatcaagtctgaaacagaataa
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