KEGG   Caenorhabditis briggsae (nematode): CBG_03711
Entry
CBG_03711         CDS       T01054                                 
Symbol
Cbr-rba-1
Name
(RefSeq) Protein CBR-RBA-1
  KO
K10752  histone-binding protein RBBP4
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03082  ATP-dependent chromatin remodeling
cbr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CBG_03711 (Cbr-rba-1)
   03083 Polycomb repressive complex
    CBG_03711 (Cbr-rba-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_03711 (Cbr-rba-1)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CBG_03711 (Cbr-rba-1)
  Histone modification proteins
   HAT complexes
    HATB complex
     CBG_03711 (Cbr-rba-1)
   HDAC complexes
    Sin3A-HDAC complex
     CBG_03711 (Cbr-rba-1)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CBG_03711 (Cbr-rba-1)
    PRC2.2
     CBG_03711 (Cbr-rba-1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CBG_03711 (Cbr-rba-1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CBG_03711 (Cbr-rba-1)
  Chromatin remodeling factors
   NuRD complex
    CBG_03711 (Cbr-rba-1)
   NuRF complex
    CBG_03711 (Cbr-rba-1)
   NuRF complex (fruit fly)
    CBG_03711 (Cbr-rba-1)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_HPS5 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_RFWD3 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 CNH Ferritin
Other DBs
NCBI-GeneID: 8581166
NCBI-ProteinID: XP_002639172
WormBase: CBG03711
UniProt: A8WWI7 A0AAE9DS27
LinkDB
Position
I:5646134..5647575
AA seq 418 aa
MSEAGSCEELTREQRVWKKNVPYLYDTMVTKELEWPSLTIQWMPDVTKTENSDSSVHRLI
HGTHTSGDVQNHLIISKFSINTDGPEFDDSKWDPEREEYGGYGAGSAAKLEGEIRINHPG
EVHRARYMPQNPYVVATRGPFDDVFIIDYTKHPSTPQDSTFRPQLRLKGHEGEGYGMSWS
NTREGHLLTAGDDGAVCHWDINANQKISGQLNQQSKYKGHSSNVEDVSFHQLHDFVFASV
GDDRKLNLWDLRHPKPQLSSIGHNAEVNCVAFNPFSEFILATGSADKTVALWDMRNLGKK
VYTLQHHENEIFQVSFSPHFETVLASSGSDDRVIVWDLSKIEDPSSNSSKISSSPPPEVL
FVHAGHVGKVADFSWNSNRPWTICSSDEFNKLQVWEISENIINIQNIKNEADIKSETE
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgagtgaggccggctcctgcgaagaattaacccgggaacagcgagtatggaagaaaaat
gttccgtatctatatgacacaatggtcacaaaagaactcgaatggccatcgttaaccatt
cagtggatgcctgacgtgactaaaacagaaaactctgattcatcggtacatcgattaatt
catggaacacacacttcgggtgatgttcaaaatcatttgattatctcaaagttttctatc
aatacggatggacccgaattcgatgactcgaaatgggatcctgaacgggaagagtatggc
ggatacggagcgggaagtgctgcaaagctggaaggtgagattcgtatcaatcacccagga
gaagtgcatcgggcgcggtacatgcctcagaatccatatgtagttgctaccagaggtccc
tttgatgatgtgttcatcatcgattatactaagcatccatccacaccccaggatagtact
tttcgaccgcaactacggctgaaaggacacgagggagaagggtatggtatgtcgtggagc
aatacaagagaaggacacttgctcaccgcaggtgacgatggagctgtttgtcattgggac
ataaatgcaaatcaaaagattagtggacaattgaatcaacagagtaaatataaaggacat
tcatcgaacgttgaagatgtatcctttcaccagcttcatgatttcgttttcgcatcagtc
ggagatgatagaaaattgaatctctgggatcttcgtcacccaaaacctcaactttcttcg
atcggacataacgccgaagtcaattgcgtcgctttcaatcctttttctgagttcattctt
gccaccggttcggccgataagacagtagctttgtgggatatgagaaatcttggaaagaag
gtttacactcttcaacatcacgaaaatgagattttccaagtttcattcagtccacatttc
gaaactgttcttgctagcagtgggtccgatgatcgagtcattgtatgggatctttcgaag
attgaagacccgtcatcaaattcttctaaaatttcttcgtctccaccaccggaagtgttg
ttcgttcatgctggacatgttggaaaggtagctgatttctcgtggaactcgaatcgccca
tggaccatttgtagcagtgacgaattcaataaattgcaggtatgggaaatctcggaaaat
atcataaatatccagaatatcaagaatgaagcagatatcaagtctgaaacagaataa

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