Caenorhabditis briggsae (nematode): CBG_03784
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Entry
CBG_03784 CDS
T01054
Symbol
Cbr-rae-1
Name
(RefSeq) Protein CBR-RAE-1
KO
K14298
mRNA export factor
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CBG_03784 (Cbr-rae-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_03784 (Cbr-rae-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_03784 (Cbr-rae-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CBG_03784 (Cbr-rae-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CBG_03784 (Cbr-rae-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_EML_2
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_RSE1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_RFWD3
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_Nup120_160
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
8581223
NCBI-ProteinID:
XP_002639229
WormBase:
CBG03784
UniProt:
A0AAE9DUY7
LinkDB
All DBs
Position
I:complement(5513517..5514766)
Genome browser
AA seq
372 aa
AA seq
DB search
MFGATGFGNKSLFGGSNLSTTASTTATATQNDDFFVDGAPEDTIQVIKFSPQPQDKPMIA
CGAWDGTTRVWMLNDSNNFEGKAQQNIPAPILDICWTEDSSKIFLACADKEARLWDLASN
QVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMASLTLTERVYA
ADVLYPMAVVALANKRIKVFNLENGPSEVKDIESPLKFQIRCISIFRDKQNQNPAGFALG
SIEGRVAVQYVEAANPKDNFTFKCHRSADLVNGYQEIYAVNDICFHPQHGTLVTIGSDGR
YSMWDKDARTKLKTSEPHPMPLTCCDVHSSGALMVYALGYDWSRGHEGNTQPGSKIVIHK
CVDDMKPRVPKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagcaacaggattcgggaacaaatcattgttcggcggatcgaatttgtctacg
actgcgagcaccacagcgacggctacacagaatgacgacttttttgttgatggtgctcca
gaagatacgattcaagtgataaaattcagcccccaaccacaagacaagcctatgatagca
tgtggagcttgggatggtacgactcgtgtttggatgctaaacgactcgaataattttgaa
ggaaaggctcagcaaaacattccagctccaattttagacatttgttggactgaggatagt
tcaaaaatcttcctcgcttgtgcagacaaagaagcccgtttatgggatctcgcctctaat
caagtcgcagtagttggaacacacgatggacctgtgaagacgtgccactggattaatgga
aacaattaccaatgcctcatgactggatcattcgacaaaacactccggttctgggacatg
aaaaacctaccaaaccaaacacaaatggcttcgctcacattaaccgagagagtttatgct
gcagatgtcctttacccaatggcagttgtagccctagcgaacaagcgtatcaaagttttc
aacctcgaaaacgggccatcagaagttaaagacattgaaagtccactcaaattccaaatc
agatgcatctcaatcttcagagacaaacagaatcagaacccagctggatttgctctcggc
tctatcgaaggccgtgtggccgtccagtacgttgaagctgcgaatccaaaagacaatttc
acttttaaatgccatcgatccgctgacctcgtcaacggatatcaagaaatctatgcggtt
aatgacatatgctttcatcctcagcacggaacactcgtgacaatcggatcagatggacga
tattccatgtgggacaaggacgctcgcacgaaactgaagacatcagaacctcatccgatg
ccattgacatgctgcgacgtgcatagttctggagcgctcatggtttacgctttgggatat
gattggagcagaggacacgaaggaaatacacaaccagggtcgaaaatcgttattcacaaa
tgtgtcgatgacatgaaaccaagagtcccgaagaagtga
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