Caenorhabditis briggsae (nematode): CBG_03807
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Entry
CBG_03807 CDS
T01054
Symbol
Cbr-sur-6
Name
(RefSeq) Protein CBR-SUR-6
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CBG_03807 (Cbr-sur-6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_03807 (Cbr-sur-6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_03807 (Cbr-sur-6)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_03807 (Cbr-sur-6)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CBG_03807 (Cbr-sur-6)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CBG_03807 (Cbr-sur-6)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CBG_03807 (Cbr-sur-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
PKHD_C
NBCH_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
8581242
NCBI-ProteinID:
XP_002639248
WormBase:
CBG03807
UniProt:
A0AAE9E3X9
A8WWS6
LinkDB
All DBs
Position
I:5416331..5418239
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AA seq
496 aa
AA seq
DB search
MVMEVDEPAVAATTSQDEQDEAQNNDVEMDTSEGPIEADQTFEAVDQINWKFNQVKGNID
SEVHTEADVISCVEFSHDGEYLATGDKGGRVVIFQRDQSGKYVKGVRSREYNVYSTFQSH
EPEFDYLKSLEIDEKINQIRWLKKKNAANFILSTNDKTIKLWKISERERKIGEDAWNLPR
TNRINTTSFRGRLQIPSIVPMELIVEASPRRVYGNAHTYHVNSISVNSDQETFLSADDLR
VNLWNLEITNESFNIVDIKPANMEELTEVITAAEFHPTQCNWFVYSSSKGSIRLCDMRDR
ALCDAYAKIFEEPEDPQSRSFFSEIIASVSDVKFSHNGRYLLTRDYLTVKVWDLNMESQP
VETYPVHNYLRTKLCALYENDSIFDKFECDWSGDDKHILTGSYHNLFRTYARGNDGDSKT
WEARPQEPYSQLRSRSVVPSAKRKRPNVPPTPEQTEEELSSDQLQFDRKILHTAWHPKDN
IIALAATNNLYIFSDV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggaggtcgacgaaccagcagttgcggcaactacatctcaagatgagcaggat
gaagctcaaaataatgacgtcgagatggacacttctgaagggcccatcgaagccgatcaa
acttttgaggctgtagaccaaattaattggaaattcaatcaagtgaaaggaaacatagat
tccgaggtccacactgaagctgatgtcatctcgtgtgtggaattttcacatgatggtgaa
tatctggctactggagacaaaggaggccgggtagtaatttttcaaagagatcagagcggg
aagtatgtcaaaggagtcaggtctagggagtacaatgtttattcgacattccaatcccat
gaaccggaattcgactatctgaaatctctagaaattgatgagaagatcaaccagattcgg
tggttaaagaaaaagaacgcagccaatttcatcctttccacaaacgacaaaactatcaaa
ctttggaaaataagcgaacgagagcgtaagattggagaggatgcttggaacctgccgaga
acaaacagaatcaacacaacttctttccgtggtcgtcttcaaattccttcgattgtgcca
atggaattgatagttgaagcgagtcctcgacgagtttatggaaacgctcatacctatcat
gtcaacagtatttcggttaattctgatcaggaaacattcttgtctgccgatgatctacga
gtcaatctctggaatttagagatcaccaatgagtctttcaacatagtcgatatcaaacct
gccaatatggaggaactaacggaagtcattactgccgcagagttccacccaactcaatgt
aactggttcgtctactcgtcatcaaaaggatccatccgattgtgtgatatgagagatcgg
gctctttgtgatgcatatgctaaaattttcgaagagccagaagacccacaatccaggtct
ttcttctcagagattatcgcttctgtgagtgacgtcaaattttcacacaatgggcgatat
ttgctaacccgagactatctcactgtaaaggtttgggacttgaatatggaatcacagccc
gtcgagacctacccagtgcataattatctacgtactaaactatgcgcactttatgaaaac
gattcgatttttgacaaattcgagtgcgattggagtggtgacgataaacatattcttact
ggttcctatcacaacttgttccgaacatacgctcggggcaacgacggcgattcgaagaca
tgggaagctcgaccgcaagaaccctactctcagcttcgatctcgatccgtcgttccgtcc
gctaagcggaagagaccaaatgtaccaccaacccctgaacagaccgaggaggagctgtca
tcagaccaacttcaattcgatcgcaagattttgcacactgcttggcatccaaaggataat
atcattgcacttgcagccactaacaacctttacatcttctcagatgtttaa
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