Caenorhabditis briggsae (nematode): CBG_03843
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Entry
CBG_03843 CDS
T01054
Name
(RefSeq) Protein CBG03843
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBG_03843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03843
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
GTPases
CBG_03843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_III
Motif
Other DBs
NCBI-GeneID:
8581272
NCBI-ProteinID:
XP_045092498
WormBase:
CBG03843
UniProt:
A8WWW3
LinkDB
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Position
I
Genome browser
AA seq
909 aa
AA seq
DB search
MESLETALKLAAASKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDS
REDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLVDVIEGI
CSQTEALIRQVIRNGQVMILVINKIDRLRVELKMSSSEAYQHMARLIEGVNSCISQVLGG
IVLEDDTWGNIEEAEEKLHFDPAKGNVIFSSALHSYAFGCEDFATLAAEKMKVEKSILLP
AMFGDFWIDSTGTIRDSAAAKNKATMFERIVLEPLWKLHDLGLVDNDVTLLSEAAKKLGF
TLKSRRANEAFDELMRSWLPLPKASFRAVARAPNVRSTFETQHRLDHLTGHRLDHPLRPF
VLGCDSTRMTIVFVVKLLQTEDKSLNSRRAICRILSGTLRKGDKLFVLQQHGSSEVTSTK
IDRISILRGRDTIPTDTVTSGMVCAIDAEILLQNTTLCSESDYPCLKIGSQTGEALVRVS
VSTQQLDDMVELREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDLNDLGLVD
LDVSEPIVPFMETVMEDVNLSAPQITEQETDCRIRDALHIKLRIAPLGSTVIEFLGKNAI
LLFAIRRGEADQTEVDDFQRKLTLVCTESLPTLKGTWWYRKPKDLIETMIERIWAFGPDR
ARSNILFNNVESYDRDLIWRKTEFGVRRYDQALVGGFELFCNSGPLCNEIMHGVAVIVEE
WTVDEEDGAIGGQMMSAMKATCSAAAKKLALRLVAAMYKCTVTTASQALGKVHAVLSQRK
SKVGEGSWISFGWSVLSPVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQ
LQFSHWQVIDEDPYWTPTTLEEVEEFGLKGDSPNHARGYMDAVKRRKGLPTEDLIVESAE
KQRNLKKNK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtctggaaactgctctaaaactagcagcggcatcgaaaccagcggagcacatc
cgtaatgtgtgtttggtagctcatgttgaccatggaaaaacgagtttcgcagattcgctt
gtttcagccaatgctgttatttctagtcgaatggcaggtaaactacgctatatggatagc
agagaagatgaacaaactcgtggaattacgatgaaatcgagtggaatcagcttgctctgt
gaaccacttcttatcaatcttatcgatagccctggacatgtggatttctctggagaagtg
acatctgctctgatcctgtccgacattgcccttctccttgttgatgtaattgaaggtatt
tgctcacaaacagaagctctgattcgacaagtcatccgaaatggacaggttatgattttg
gttatcaacaaaatcgatcggctgagagtagaattgaagatgtcgtcaagcgaagcatat
caacacatggctcgtttaattgaaggcgtcaacagttgtatcagtcaagttctcggagga
atcgttttagaagatgatacgtggggaaatattgaagaagcagaagaaaaattgcatttt
gatccagcaaaaggcaatgtaattttctcatcagctcttcattcgtacgccttcggatgc
gaagattttgccacgttggcagccgagaaaatgaaggtggagaagtcgatattactacct
gcaatgtttggagatttttggattgattcaactggaaccattcgagattctgctgctgct
aaaaacaaggcaactatgtttgagcgaatagttctggaacctctttggaagcttcacgat
ctcggtttagtagataatgacgtcacattattgtcagaagctgccaagaaactcgggttc
actttgaagtcgcgtagagcaaatgaggcatttgacgaattgatgagaagttggttacca
ctcccgaaagccagtttccgtgctgttgctcgagctccgaatgttcgatccacattcgag
acacaacatcgtttggatcatttaaccggacatcgtttagatcatccattgagaccgttt
gtattgggatgcgattctacacgaatgacgatagtttttgttgtaaaactccttcaaact
gaagacaaaagtttgaattcgcgaagagcaatttgccgtattctcagtggaactcttcgg
aagggcgacaaattgtttgtccttcagcagcatggtagcagtgaagtcacttcaacgaag
atcgaccgaatttctattctccgtggtcgtgacaccattcctacggatacagtaacatct
ggaatggtgtgtgccattgatgcggaaatccttttgcaaaacacaacgctctgcagcgaa
agtgattatccatgtcttaaaattggatctcaaactggcgaagctctggtcagggtgtca
gttagcactcagcaattggatgatatggttgagttgagagaaaaactgaaattacttgca
cttttggataccagcttaaaagttatggagcttgaaaatggagagctagcgatggttaca
gccggagaagttcatctacagaaatgtatcaaggatttgaacgatttgggtctagtggat
ctggatgtttctgaaccgattgttccattcatggagactgtaatggaagatgtaaatctc
tcggcaccacaaatcacggaacaagaaaccgactgccgcattcgagatgctcttcatatc
aaacttcgcatagctcctcttggaagcacagtaatagagttccttggtaaaaacgctatc
ctactctttgcaattcgtcgtggtgaagcagatcagacggaagtagatgacttccaaagg
aaactaactctggtttgcacagagtctttaccaacgctgaaaggaacatggtggtaccga
aaaccaaaagatcttattgaaacaatgatcgaacgtatttgggcgtttgggcctgataga
gccagatccaatattctattcaacaatgtcgaaagttacgatagagatctaatttggaga
aaaaccgaattcggtgtgagacgatacgaccaagcacttgttggtggattcgaattgttc
tgcaactctggaccactttgtaatgaaatcatgcatggagtcgctgtaattgtggaagaa
tggactgtggatgaggaggatggtgccatcggaggacaaatgatgtcagcaatgaaggca
acatgctcagcagctgcgaaaaagttggctcttcgactggtagctgccatgtacaagtgt
accgtaaccactgctagtcaggcgttgggaaaagtgcatgcggttttgtcacaaaggaaa
tccaaggttggtgagggatcatggatcagttttgggtggtctgttctatcacctgtcctt
tccgaagatatcaatgaggcaacgaatctcttcgaagtggtatcactgatgcctgttgtt
gagtcattctcattctgtgatcaacttcggaagttcacttctggaatggcatctgctcag
cttcaattctcgcactggcaagtgattgatgaagatccctactggacaccgacaacgttg
gaagaagtagaagagttcggattgaaaggagacagtccgaatcatgcccgaggatacatg
gatgctgttaaaaggcgtaaaggattgccgactgaagatctgattgtggagtctgcggag
aagcagagaaatttgaaaaaaaataaataa
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