Caenorhabditis briggsae (nematode): CBG_03935
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Entry
CBG_03935 CDS
T01054
Name
(RefSeq) Protein CBG03935
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_03935
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
CBG_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
8581349
NCBI-ProteinID:
XP_002639356
WormBase:
CBG03935
UniProt:
A8WVT0
A0AAE9IXW7
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All DBs
Position
I:complement(4893288..4898140)
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AA seq
660 aa
AA seq
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MDSLPRGHAPLCRTTGGGGNISNQRGLGTRLNPYYQSTPHQPTVQSMSQPIQSNGYNNHS
QQQQKMMNYGNGGAASAGGANMSGQVLLEGPPPGLVAVQSSSALDFDSCYSSCDDISHPS
LSRESSDPSKIDDDQKTLMIRYPAPEVVEFATKLGYSTEQLSHVLNTIGVDSRMDDVLSE
LVKMGLPSGNVRSSDGVMAISQPSSSSTSANHRPVAPSSSAPPMSSAIAISSASCSWAPY
YPQYTPNMNLRSVVVDGSNIAMLHGRKEVFSCAGLRECLHYFLERGHPEVLIFIPQYRRE
QPRSDSPITDQHILLEIERHIIYTPSRNVNGRRVVCHDDRYILRTAELKDAVIVSNDEYR
DLTRENPAWKKIVEERLLMFTFVEDKFMPPDDPSGRNGPRIESFLSKVPVSSPNPLVCPY
ARKCTYGNKCKFYHPERANGQHMSVTERLMKENQQKKSLGAVKSMQYEMFKNKHAALSRT
QSLNVVKPLTENICQLPPTPESPIQMPRQHMQLQQANSAPWQQHSVVQRHGSSPLTPVNR
QMNNAHPEMYNQQHHHKVLPHQHGVIGSQRPSKMATAVSQTHLFAPSTAVWGHSELSVGP
VNTGSDANESLSEVRARVHFHLCHIFPHDFVESVMAANPEEVNAPVLCELIIRAQKDYRK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggattccctgcctcgaggccacgcccctttgtgccgaacaacaggaggaggaggaaat
atcagtaatcagagaggacttggcactcgactcaatccctattatcagtcaacaccacat
caaccaacggttcaatcaatgtcacaaccgattcagtcaaatggatataataatcactcg
cagcagcagcagaaaatgatgaattacggaaatggcggagcagcgtcggcgggaggagcc
aacatgtcgggacaagtacttctagaaggaccaccacccggtttggtggcagttcaatct
tcgagtgcattggattttgattcttgttatagttcctgcgacgacatctcccatccatca
ctgagtcgagagtcttcggatcccagtaaaatagatgatgaccaaaaaactttgatgatc
agatatccagcaccggaagttgttgaattcgcgaccaagttgggatactcgacggagcaa
ctcagccacgttctgaatacgattggagtcgattctagaatggacgacgtgctatcagaa
cttgtgaaaatgggacttcctagtggtaatgtcaggtcatctgacggtgtaatggcgatt
tcgcaaccatcgtcatcgtcaacatctgcaaatcatcgtccagttgctccttcctcatca
gccccacctatgtcatctgcaattgctatatcatcagcttcctgttcctgggcaccatat
tatccacagtataccccgaatatgaatctgcgatcagtagtagttgatggatcgaatatt
gccatgttacacggccgcaaagaagtgttctcttgtgccggtctccgcgagtgtctccat
tattttcttgaacggggacatcctgaagtcctgattttcattccacaatacagaagagaa
caaccacgatcggacagcccaatcaccgatcaacatattctattggaaatcgaacgacat
attatttataccccatctagaaacgtaaacggtcgtcgcgtagtgtgtcacgacgataga
tatattcttcgaactgcagaactgaaagacgccgtgattgtctccaacgacgagtatcgt
gatttgacgagagagaatccagcgtggaagaagattgttgaggagagactccttatgttc
acttttgttgaggacaaatttatgccaccggatgatccatcaggtcgcaatggtccaaga
atcgagagtttcctgtcgaaagttccagtttcgtcaccaaatccactagtttgtccatat
gcaagaaaatgtacatatggaaataaatgcaagttttatcatccggaacgtgcaaatgga
caacatatgagtgtaacggagagattgatgaaggagaatcagcagaagaaatctttggga
gcagtgaaatctatgcaatacgagatgttcaaaaacaaacacgccgccctttcccgtact
caatccctaaatgtggtcaaaccactcactgaaaacatctgccaactgcctccaactccg
gagagccctatccagatgccacgtcagcatatgcagctacaacaggcaaatagtgcacct
tggcaacaacacagtgtagtacagagacatggatcgtctccactaactccagtgaatcga
caaatgaataatgctcatcctgaaatgtacaatcaacaacatcaccataaagtacttccg
catcagcatggtgtaattggaagtcaacgaccatctaaaatggcaactgcagtatcccaa
acgcatctgtttgcaccatcaactgctgtttggggtcactcggaattgtccgttgggcct
gttaatactggatcggatgcaaacgagagtctctccgaggttcgtgctcgtgtacacttt
catctttgtcatattttcccccacgacttcgtggaatccgtgatggctgcgaacccagaa
gaagtgaatgctccagtgctctgtgagctcatcattcgtgctcaaaaagactatcgcaag
tga
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