Caenorhabditis briggsae (nematode): CBG_03989
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Entry
CBG_03989 CDS
T01054
Symbol
Cbr-abtm-1
Name
(RefSeq) Protein CBR-ABTM-1
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_03989 (Cbr-abtm-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_03989 (Cbr-abtm-1)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
CBG_03989 (Cbr-abtm-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DUF87
AAA_22
AAA_16
Zeta_toxin
AAA_21
AAA_28
Thymidylate_kin
AAA_15
G-alpha
AAA_24
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
8581394
NCBI-ProteinID:
XP_045092548
WormBase:
CBG03989
LinkDB
All DBs
Position
I:4654181..4657291
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AA seq
878 aa
AA seq
DB search
MLQLRLISSLRNSSSTWKSQGLYRNFSTLTKKPTLIKNAPQILSKNHTSDWCERDVSVAH
FTLVTESDSVVLVHAVNSLSVLNELSLSILFPACETSRGFELAHALLIVASFADTATVSE
VAVVSDFDSAHSRSSESKNEKSKQTINSASFHEDMLSPWRQQSSAFAGKEDRKKKERDET
DEDCMLRAPFMQSLSLSCLWEFPDSFLLILTASHLRLGYCGGVFEQMGIRFLIFQASGQL
TGYQLVQRLLKYVWPKDKPEIKRRVLVALSLLVAAKLANVSVPFLLRDVVNYYNGKAPEF
LKLTFAGTASQTIFTAGIATCIAYGLARATSAAFNELRNAVFAKVAQNSVRSISRSIFLH
LHSLDLSFHLNRQTGALSKAIDRGTRGMSFVLSSLIFNLIPTAVEIGMVSALFTGTLGAE
FAYMTMGSIGMYGVATLGITRWRTKFRHQMNQADNDAGNKAIDSLINYETVKYFNNEKFE
ADRYDHFLKKYEGASLKTTSSLALLNFTQNAIFSGALIGVMCMAGNRIAAGDFTIGDLIL
ANTLLFQLSIPLNFLGSVYREVRQGLVDMNQMFSLLTLKPKIVEVSDAKKLEITGNHITL
NFEDVHFGYLPEKPILQGLNLEIPAGKKVAIVGGSGSGKSTIVRLLYRLYDTESGTVKIN
GEETRSLTLDSLRQSISIVPQDSVLFHDTIYYNLAYGRPSASKEEVIQAAKMADLHESVL
RMPNSNKINNCFQGYETLVGERGLKLSGGEKQRVAIARAILKNAPFVIYDEATSSLDAIT
EANIMKALKGAVEKRTSLFIAHRLATIVDADIIYVLQEGKVVEKGSHFDLLAQDGLYAEL
WRSQNIHGVAPKKTKQDDDDLLLELDLDKCCGSSSCNR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgttacagttacggttaatatctagtttaagaaactcgtcaagcacttggaagtcacag
ggactttatcgcaacttctcaaccttgactaaaaaaccaactcttatcaagaatgcccca
caaatcctcagtaaaaatcacacatccgattggtgcgaacgagatgtatccgttgctcat
ttcacacttgtaacggaatccgacagcgttgttcttgtacatgcggtcaatagtctctcc
gtgcttaacgaattgagcctgagcatcctgttcccagcttgcgaaacatcccgcggtttc
gaacttgctcacgcactcctcatagtagcttcctttgccgatacggcgacggtttccgag
gtcgcagtcgtctccgattttgacagcgctcacagtagaagcagcgagtccaagaatgaa
aagagcaaacaaacgatcaatagtgcaagttttcacgaggacatgctttcaccctggcgc
cagcagtcaagtgcctttgcaggtaaggaagataggaagaaaaaagaaagagatgaaact
gatgaggattgtatgctgagggctccttttatgcaaagcctcagcctgagttgtctttgg
gaattcccagactcttttcttttgattcttaccgcttcccatttacgtctgggatactgt
ggtggcgttttcgaacaaatgggaatcagatttttgatttttcaggcaagtgggcagtta
acaggataccaattagtgcagagactgctcaaatatgtgtggcccaaggataaaccagaa
atcaaaagaagagttttagttgccctctccctcttagtagcagcgaaattggccaacgtc
tccgttccatttctgcttcgagatgtcgtaaactattataacggaaaggctcccgaattt
ctgaagctaacttttgctggaacagcttcacaaacaattttcaccgctggaatcgccaca
tgtatcgcctatggtttggctcgtgctacttccgccgcattcaacgagctaagaaatgca
gtatttgccaaagttgcccaaaattctgtcaggagcatctccagatcaattttccttcat
ctgcattctctggatctgtctttccatctcaacagacaaactggagcactttcaaaagcc
attgacagaggaacaagaggaatgagcttcgttctctcatccttaatcttcaatctcatc
cctaccgctgtggagattggaatggtttcagctctattcacaggaacacttggagctgaa
tttgcatacatgacaatgggaagcatcggaatgtacggagtagctacgttgggaattaca
agatggagaaccaagttccgtcatcagatgaatcaagcagataatgacgctggaaacaaa
gccatcgattctttgatcaactacgaaacagttaaatatttcaacaacgaaaaattcgaa
gctgatagatacgatcatttcttgaaaaagtatgaaggcgcgtcgttgaagacaacttca
tctctggctcttctcaatttcacacaaaatgccattttttccggagctctgattggagtt
atgtgcatggcgggaaatcgtattgctgctggagacttcaccattggagatctcattcta
gccaacacgcttctcttccagctctcgatcccattgaacttcctgggatccgtctatcgc
gaagtgcgtcagggtcttgtagacatgaatcagatgttctctttgctaacgttgaaacca
aagattgtcgaagtttctgatgcgaagaaattggaaatcacagggaaccacatcactttg
aatttcgaagatgtgcattttggatatcttcccgagaaaccaattcttcaaggattgaat
ttggaaattccagctggcaagaaagtggcaattgtcggaggaagtggttctggaaaatca
actatcgtccgtcttctctaccgtctttacgacacagagtctggaacagtcaaaattaac
ggagaggaaacgcgtagtttgactctagattcactccgtcaaagcatcagtatcgttcca
caggattctgtacttttccatgacaccatttactataatttggcatacggtagaccatca
gcatccaaggaagaggttattcaagcggcgaagatggctgatttacatgaatcagttctc
agaatgcccaacagtaacaaaataaacaattgtttccagggatacgaaacgttagttggc
gagagaggcttgaagctgtctggtggagaaaaacagagagtcgccatcgcaagagcgatt
ttgaaaaatgctccatttgttatttatgacgaagcaacgtcatcattggatgctatcacc
gaagcgaacatcatgaaagcgctcaaaggagccgttgagaaaagaacatcgttatttatt
gctcatcgattggccactattgtagacgcagatattatttatgtgcttcaagaaggaaaa
gtagttgaaaagggatctcattttgatcttctagctcaggatggtctatatgccgaatta
tggagatctcagaacattcatggagtagcgcctaaaaagacaaagcaagatgatgatgat
cttctgttagaactggatcttgataagtgttgcggtagttctagctgcaaccgatag
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