Caenorhabditis briggsae (nematode): CBG_03992
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Entry
CBG_03992 CDS
T01054
Name
(RefSeq) Protein CBG03992
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03992
Enzymes [BR:
cbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBG_03992
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
90S particles
Helicases
CBG_03992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8581397
NCBI-ProteinID:
XP_002639404
WormBase:
CBG03992
UniProt:
A0AAE9DUE3
A8WVX9
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Position
I:complement(4649579..4651920)
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AA seq
750 aa
AA seq
DB search
MPHTNKKVNNQQWKGGNGKRKRKFDGEQDASVMKVLKEKRLQKKRKQDLKGQEEKMLEEV
ENKYQEMLKKSSRTFLRFEDFPLSWRTLEGLKENEYVKPTEIQRDTIAHSLTGADVVGAA
KTGSGKTLALVIPILEALWRVKWSPEYGLGALVISPTRELALQTFSTINAVGKHHGFSCG
LVIGGSEVAFERNRISGINIIVCTPGRLLQHMDENEQMNCDSLQILVLDEADRMLDMGFS
KQLNSIINNLPAERQTLLFSATQTRNVKDLSRVCTNDPVFVSVHENSAAATPDNLKQSYV
VVEEEIKINTLWSFIEAHKKKKSLVFVSSCKQARFLTEVFSQLRPGLPVMGLWGTMNQKK
RIETFTKYDESKAAVLIATDVASRGLDFERIDWVIQVDCPAQIDDYIHRVGRSARMEESG
NSLLMVTSSQEEAMISKLAKHSIPIEELKIHPDAMTDVRLKLRAILAESQELKEYAQKSI
VAYLRSIYTMKDKKIFNVNTIDAAALADSFGLVSVPRIRFLDKNKNDKKKTKTTTIKAAD
DNCDESEDEEEQKPSKDHSLVGKFAIDEEDEDLFTVKKSKDGTEDQPKEEFKVEEEEEVA
EKITLKKNKPLKKALTKVGAAKKILNKNLRVNTKKTFEEDDDAKVEGPSTMTSYGLDIEK
AKQDMKSVDKEDRRRFKELREQRRQEKLAKKNKKSEVFEMEAEETDDEPDISWLPDPDAV
RTKYEESDDNYESMDASLLEKQALAMLGRN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacaaataaaaaagtcaacaatcagcaatggaaaggtggcaacggtaaaaga
aaaaggaagttcgacggagaacaagatgccagtgtgatgaaagttctgaaagaaaaaaga
ctgcagaaaaaacgaaagcaagatttgaaaggacaggaggagaaaatgctcgaagaggtt
gaaaacaagtatcaggaaatgctcaagaaaagttctcgtacgtttcttcgctttgaagat
ttcccactgtcatggagaactctcgaaggcctcaaagaaaatgaatatgtgaagcccact
gaaattcaaagagacactattgctcattctctcactggagctgatgtggttggagcagca
aaaacaggaagtggaaaaacattggctcttgtcattcctattttagaagctctttggcgg
gtcaaatggtctcccgagtatggtcttggtgctctcgtcatttccccgactcgtgagctt
gcacttcaaacattcagtacaattaatgctgttggaaaacatcatggattctcatgtgga
ctggtgattggaggaagtgaagtagcgtttgaaagaaaccgaatcagtggcatcaacatt
attgtttgcactcctggtagactcctacaacatatggatgaaaacgaacagatgaactgt
gactcgttgcaaattctcgtattggatgaagccgaccgaatgctcgatatgggtttctcg
aaacagttgaactcaatcatcaacaaccttcctgcagaaagacaaacccttctattctcg
gcaacccaaaccaggaatgtgaaggatcttagcagagtttgtactaatgatccagtattc
gtttctgttcacgagaactcagccgcagccactccagataatttgaagcagtcttacgtt
gttgtcgaagaagaaataaaaataaataccctttggtcgtttatcgaggcacacaagaag
aagaagtcactagtgttcgtgagtagttgcaagcaagctcgattcttgacggaagtattc
tctcaacttcgacctggtcttccagtaatgggcttgtggggaacgatgaatcagaagaag
cgaatcgagacgttcacgaaatatgacgagagcaaagctgcagttctcatcgctacagat
gttgcttcaagaggtctcgatttcgaacgaattgactgggtcatccaggttgattgtcca
gctcaaatcgatgattacattcatcgtgtcggtagaagtgcaagaatggaggagtctggt
aattcccttctaatggtaacctcgtctcaagaagaagctatgatttccaaactggctaaa
cactcgattcctatcgaagaattgaaaatccatccagatgcgatgactgatgtccgattg
aaacttcgtgctattcttgcggaatcacaagaactgaaagaatatgcacagaaaagtatt
gtcgcttatcttcgatcgatttataccatgaaagataaaaagatcttcaatgtgaacacc
attgatgctgctgctctcgccgattcatttggtcttgtatctgtgccaagaatacggttc
ctcgacaagaataagaatgacaagaagaaaacaaaaacgacaacaattaaagctgctgat
gataattgtgacgaaagtgaagacgaagaagagcagaaaccttcaaaagatcattctctt
gttggcaagtttgcgattgatgaggaagatgaagatctgttcacagtgaagaaatccaaa
gatggcacagaagatcagcccaaggaggaatttaaagtagaagaagaggaggaagtggcg
gagaagatcactttgaaaaagaacaaaccactcaagaaggcgttgactaaagtcggagct
gcaaagaagattctcaacaagaaccttcgagtcaacacgaagaagacgttcgaggaggat
gatgatgcgaaggttgaaggaccgtcgaccatgacatcatacggtttagatattgaaaaa
gcgaagcaggacatgaagagcgttgacaaagaggatcgtcgtagattcaaagagcttcgt
gaacagaggcgtcaagagaagttggcaaagaagaataagaagtcagaggtgtttgaaatg
gaagcggaagaaactgatgatgaacctgatatttcttggcttccggatccagatgctgtt
cggacaaaatatgaggagagtgatgacaactacgagtcaatggatgcatcgttgctggaa
aaacaagcattggcgatgctcggaagaaactga
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