KEGG   Caenorhabditis briggsae (nematode): CBG_03993
Entry
CBG_03993         CDS       T01054                                 
Name
(RefSeq) Protein CBG03993
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CBG_03993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbr03009]
    CBG_03993
Ribosome biogenesis [BR:cbr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CBG_03993
SSDB
Motif
Pfam: WD40 UTP15_C WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Kelch_6 WDR54
Other DBs
NCBI-GeneID: 8581398
NCBI-ProteinID: XP_002639405
WormBase: CBG03993
UniProt: A8WVY0 A0AAE9DTK4
LinkDB
Position
I:complement(4647498..4649401)
AA seq 559 aa
MAQPYLPAEKFLSRKQDTILLDEDVVYWKRMQQLTVFQEPSVVSSVRISPKKPFHVATTS
SVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDEGKVRIFDVEKTTGSSKV
ALRVMQASQSTVKSVHFSPRGDTIFSLADDGKIKQYRVADTAYGVNAVPLIEIQAHDDAI
RCGAVSSLNDHIVLTGGYDHKVRLWDIRSKEKTMELNCEHPVESVLFLPGEQLIATAAGP
IVKIWDTTTGRPLTVLQAHYKTVTSLRLATNSTCLLTAGIDRRVNAFRTTNYSLIHSWSM
PSPVLDIDVSRDDQTMAVGMGNLLALYRRAEIKKETTATAMIEDKRSLVRTSAPPVKLAE
KDRDSRKVEVVAKNADKLKIPKIDGMLSNFKHSGVIRLLFSGKFRSSVDAAVVSYLRVIV
MRGAIHRALAGQETTVQKNLLIFLNHHLFRTEYFSILKDVTIAFFDVYASDKLDRDVFKQ
VQRLRVTLSRELEVQKMISSLVGSVDLIVSTTKINIKSTADLIEDNDVFGEPTIRARDLD
ELKPSKGGPEVEEEPMQTN
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggctcaaccgtatcttccagctgagaaatttctctccagaaagcaggatacgatattg
cttgacgaggatgtggtttactggaaacgaatgcaacaactcaccgtattccaagagccc
tcagttgttagctcagttcgtatttcacccaaaaaaccgttccacgtggcaacgaccagc
agcgttcggttgacactctatgacacagtggtttgtgagccactcaatttgttcagtaga
ttcaagaaaggtgtatgctcaattgattttcgtcatgacggaagactgctggccattgga
ggagatgaaggaaaagtaaggattttcgatgtagagaagacaactggatctagcaaagtt
gcacttcgcgtcatgcaagcatctcaatcaacagtcaaaagtgtacacttctcaccacgc
ggtgacacgatcttctcgctagccgacgatggaaaaataaagcaataccgagtagctgac
actgcttacggagtgaacgcagttccattgatcgaaattcaagcacacgacgacgcaata
agatgtggagcggtgtcgtctctaaatgaccatattgtattaacagggggttatgatcat
aaagtgaggctatgggatattcgaagcaaagaaaaaactatggagttgaactgtgagcac
ccagtggagtcagttctattcctcccaggagaacaacttattgccactgctgctgggcct
attgttaaaatatgggataccacaactggaagaccactaactgttcttcaagctcattac
aaaacagttacttctcttcgtcttgccacaaactcgacatgtcttctgaccgctggaatt
gacagaagagtgaacgctttccgaactaccaactactccctgattcattcatggtcaatg
ccatctccagtcctcgatattgatgtctccagagacgatcagacaatggccgtcggaatg
ggaaatcttttggcactctatagaagagctgagatcaaaaaagaaactacggcgacggct
atgattgaagacaagcgatctttggttagaacttcagctcctcctgtcaagttggctgaa
aaagatagagattcaagaaaagtggaagttgttgcaaaaaatgcagataaactgaagatt
cccaaaatcgatggaatgctttccaacttcaagcactctggggtcattcgactacttttc
agcggaaagttccgctcgagtgtagatgcagctgtcgtcagttaccttcgagtaattgtt
atgcgaggagctattcatagagctttggctggtcaagaaactactgttcagaaaaatctt
ttaattttcctcaatcaccatttgttcagaacagagtatttctctatcttgaaagacgtc
accattgcctttttcgatgtttatgcatcagacaagctggacagagatgtcttcaaacaa
gtacaacgtcttagagtgacgctcagccgtgaacttgaagttcagaagatgatctcttct
ctggttggatccgttgacttgattgtctctactaccaaaatcaacatcaaatcaacagct
gatctaattgaagacaatgatgtattcggagagccgacaatcagagcgagagacttggat
gaactaaaaccatcaaaaggtggtccggaggtagaggaagaaccaatgcagactaattaa

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