Caenorhabditis briggsae (nematode): CBG_03993
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Entry
CBG_03993 CDS
T01054
Name
(RefSeq) Protein CBG03993
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBG_03993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_03993
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CBG_03993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_RFWD3
NBCH_WD40
WD_LRWD1
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Kelch_6
WDR54
Motif
Other DBs
NCBI-GeneID:
8581398
NCBI-ProteinID:
XP_002639405
WormBase:
CBG03993
UniProt:
A8WVY0
A0AAE9DTK4
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Position
I:complement(4647498..4649401)
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AA seq
559 aa
AA seq
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MAQPYLPAEKFLSRKQDTILLDEDVVYWKRMQQLTVFQEPSVVSSVRISPKKPFHVATTS
SVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDEGKVRIFDVEKTTGSSKV
ALRVMQASQSTVKSVHFSPRGDTIFSLADDGKIKQYRVADTAYGVNAVPLIEIQAHDDAI
RCGAVSSLNDHIVLTGGYDHKVRLWDIRSKEKTMELNCEHPVESVLFLPGEQLIATAAGP
IVKIWDTTTGRPLTVLQAHYKTVTSLRLATNSTCLLTAGIDRRVNAFRTTNYSLIHSWSM
PSPVLDIDVSRDDQTMAVGMGNLLALYRRAEIKKETTATAMIEDKRSLVRTSAPPVKLAE
KDRDSRKVEVVAKNADKLKIPKIDGMLSNFKHSGVIRLLFSGKFRSSVDAAVVSYLRVIV
MRGAIHRALAGQETTVQKNLLIFLNHHLFRTEYFSILKDVTIAFFDVYASDKLDRDVFKQ
VQRLRVTLSRELEVQKMISSLVGSVDLIVSTTKINIKSTADLIEDNDVFGEPTIRARDLD
ELKPSKGGPEVEEEPMQTN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccgtatcttccagctgagaaatttctctccagaaagcaggatacgatattg
cttgacgaggatgtggtttactggaaacgaatgcaacaactcaccgtattccaagagccc
tcagttgttagctcagttcgtatttcacccaaaaaaccgttccacgtggcaacgaccagc
agcgttcggttgacactctatgacacagtggtttgtgagccactcaatttgttcagtaga
ttcaagaaaggtgtatgctcaattgattttcgtcatgacggaagactgctggccattgga
ggagatgaaggaaaagtaaggattttcgatgtagagaagacaactggatctagcaaagtt
gcacttcgcgtcatgcaagcatctcaatcaacagtcaaaagtgtacacttctcaccacgc
ggtgacacgatcttctcgctagccgacgatggaaaaataaagcaataccgagtagctgac
actgcttacggagtgaacgcagttccattgatcgaaattcaagcacacgacgacgcaata
agatgtggagcggtgtcgtctctaaatgaccatattgtattaacagggggttatgatcat
aaagtgaggctatgggatattcgaagcaaagaaaaaactatggagttgaactgtgagcac
ccagtggagtcagttctattcctcccaggagaacaacttattgccactgctgctgggcct
attgttaaaatatgggataccacaactggaagaccactaactgttcttcaagctcattac
aaaacagttacttctcttcgtcttgccacaaactcgacatgtcttctgaccgctggaatt
gacagaagagtgaacgctttccgaactaccaactactccctgattcattcatggtcaatg
ccatctccagtcctcgatattgatgtctccagagacgatcagacaatggccgtcggaatg
ggaaatcttttggcactctatagaagagctgagatcaaaaaagaaactacggcgacggct
atgattgaagacaagcgatctttggttagaacttcagctcctcctgtcaagttggctgaa
aaagatagagattcaagaaaagtggaagttgttgcaaaaaatgcagataaactgaagatt
cccaaaatcgatggaatgctttccaacttcaagcactctggggtcattcgactacttttc
agcggaaagttccgctcgagtgtagatgcagctgtcgtcagttaccttcgagtaattgtt
atgcgaggagctattcatagagctttggctggtcaagaaactactgttcagaaaaatctt
ttaattttcctcaatcaccatttgttcagaacagagtatttctctatcttgaaagacgtc
accattgcctttttcgatgtttatgcatcagacaagctggacagagatgtcttcaaacaa
gtacaacgtcttagagtgacgctcagccgtgaacttgaagttcagaagatgatctcttct
ctggttggatccgttgacttgattgtctctactaccaaaatcaacatcaaatcaacagct
gatctaattgaagacaatgatgtattcggagagccgacaatcagagcgagagacttggat
gaactaaaaccatcaaaaggtggtccggaggtagaggaagaaccaatgcagactaattaa
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