Caenorhabditis briggsae (nematode): CBG_04042
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Entry
CBG_04042 CDS
T01054
Symbol
Cbr-ngp-1
Name
(RefSeq) Protein CBR-NGP-1
KO
K14537
nuclear GTP-binding protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBG_04042 (Cbr-ngp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_04042 (Cbr-ngp-1)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
GTPases
CBG_04042 (Cbr-ngp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGP1NT
MMR_HSR1
RsgA_GTPase
FeoB_N
DUF4724
Motif
Other DBs
NCBI-GeneID:
8581440
NCBI-ProteinID:
XP_045092566
WormBase:
CBG04042
LinkDB
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Position
I:4448230..4451096
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AA seq
731 aa
AA seq
DB search
MVKARKEGKVSKKLKQKPDYGPVKNRHTFRGSNHSMNPDRKADSKDKSQRSKATINRLRM
YKSFKPIRDSKGKIVKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQLQKFQANLGKV
LSDPFQVVMKQTKLPISLLQEKAKTQRVHVTETESFEYTFGKKALRKKAKLNDATLEEMT
RSAEDREVKYKPELDLSREKELGDRPENQNPLFRAGQSNRVWGELYKVIDSSDVVVQVVD
ARDPMVSLQKLYENIIVRSKMNVFSMSTKTNSLEKTHNVRMKVFPSILPHFFLSCFNSKR
ERKRMGEKQRRENLYIDESKNSFSRSLCAISGTRCRHVEEFLRKEKPHKHLVTVINKVDL
VPTWVTRKWIGELSKEMPTIAFHASINNSFGKGAVINLLRQFAKLHPDRPQISVGFIGYP
NVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQGDTETQIILK
GVVRVENVKDPENHIQGVLDRCKPEHLRRQYGIPEFSGVDDFLTKIAIKQGRLLKGGDPD
IVAIAKVVLNEFQRGKLPYFVPPPGCEERAKKDYEEAPINEKCADDDEQLPPDAQLELDD
VARNGGPEDDDAIDDEEEEEMTEIGSTCSGLTDLSGISDLAEDLEEVEDVTEEPTSSDAA
DKKKNDVASVRTRGKRGGKKANKAKLSGKTIVQAASEKKDKSVVDFAKPGAQKTNMWRKK
LEKRRKIKHQK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagccagaaaggaaggaaaagtcagcaagaagctgaaacaaaaaccagactat
ggaccggtcaaaaacagacacactttccgtggttctaatcactccatgaacccagatcgt
aaggcagactccaaagataaaagtcaacgatcaaaggctaccatcaaccgtcttcgtatg
tacaaaagctttaagccaattcgtgattcgaaaggaaaaatcgtgaaagcagctccattc
caagacacgttggcttcaggtacacaagcgagaatcgagcctaaccggaaatggttcgga
aacactagaatcattggacaagaacagcttcaaaagttccaagccaatttgggaaaggtg
ctgagtgacccattccaagttgtcatgaagcaaaccaagttgccgatcagtctccttcaa
gaaaaagctaagacgcagcgcgtgcatgttactgaaacagaaagcttcgagtatactttc
ggaaagaaagcattgagaaagaaggcaaagctgaacgatgccactctggaggaaatgacg
agaagcgcagaagacagggaagtcaaatacaaaccggaactagacttgagcagagagaaa
gagctcggtgatcgtcctgagaatcagaatcctcttttccgtgctggacagagtaacaga
gtttggggagagctgtacaaagttatcgactcttcggatgttgtcgttcaagttgtcgat
gctagagatcctatggtgagtctacaaaaattgtacgaaaacataatagtgcgttcaaaa
atgaatgtcttttctatgtcaactaagacgaattcactagagaaaacacataacgttcgt
atgaaagtttttccgtctattcttccacacttctttttgtcttgcttcaacagcaagcga
gagaggaaaaggatgggggaaaaacaaagacgagaaaacctttatattgatgaatctaaa
aactccttctcgagaagcctttgcgctatctccggtactcgttgtcgccacgttgaggag
ttcttaagaaaggagaaaccacacaagcatcttgttactgttatcaacaaggtcgacttg
gtacctacatgggttacaagaaaatggattggagaactttcgaaagaaatgccaacaatt
gcattccatgcatccattaacaactcgttcggaaaaggagctgtcatcaatctactacgc
caattcgccaaactccacccagaccgccctcaaatcagtgttggtttcattggatatcca
aatgtcggaaagtcatctcttgtcaacactcttcgcaagaagaaagtttgcaaaacagct
ccgattgctggagagacgaaagtctggcaatacgttatgctgatgcgcagaatctatctg
atcgattctccaggagtcgtttatccacaaggagacacagaaacccagatcattctgaaa
ggagttgttcgtgtggagaacgttaaagacccggaaaatcacatccaaggagttctcgat
cgatgcaaaccagaacatcttcgccgtcagtatggtatcccggaattttctggcgtagat
gatttcttgaccaaaatcgcaatcaaacaaggtcgtcttttgaaaggaggagatcctgat
atcgttgctatcgctaaggttgtacttaatgagttccaaagaggaaagcttccatatttt
gttccacccccgggatgtgaggaaagagccaagaaggactacgaagaagccccaatcaat
gaaaagtgtgctgatgacgacgaacaactgccgccagatgcacagctggagttggatgat
gttgctagaaatggtggaccagaagacgacgacgcaattgatgacgaagaggaggaggaa
atgaccgaaatcggatcaacctgttcgggccttactgacctctccggaatcagtgatttg
gctgaggatctcgaagaagtcgaagacgtcactgaagaaccaacctcgagcgatgccgca
gacaaaaagaagaacgacgtcgctagcgtcagaactcgtggcaagcgaggaggaaaaaaa
gctaataaagcaaagttgtctggaaagactattgtccaggctgcatctgaaaagaaggat
aagagcgttgttgatttcgccaaaccaggagctcaaaagacaaacatgtggagaaagaag
ttggagaagagacgaaagatcaagcatcagaagtaa
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