Caenorhabditis briggsae (nematode): CBG_04064
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Entry
CBG_04064 CDS
T01054
Symbol
Cbr-lin-35
Name
(RefSeq) Protein CBR-LIN-35
KO
K04681
retinoblastoma-like protein 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
CBG_04064 (Cbr-lin-35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_04064 (Cbr-lin-35)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
CBG_04064 (Cbr-lin-35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
8581462
NCBI-ProteinID:
XP_045092575
WormBase:
CBG04064
LinkDB
All DBs
Position
I:complement(4375231..4380922)
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AA seq
956 aa
AA seq
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MPKRATDDPGTSSTNPDSEHSPYEDLTESSQFSSPSGEPAPKRMDIDIKEELNESNPEPN
AALNPANIKLESDNREEGEEDEEEEDGNSQSPIAVLEDDEEDEDDADSVIDKTNTPEPSD
SFLECCTKANLPSEITVASWEIYYHAVQRVSLEVSGKKCFQGSEAAWQLSAIYYYLLSKG
IKRRGKASRLLTQPFPISILTIANTFDVSVAELIDKTTRFAEIIHSRKMRRYLEYIRRLQ
EGLAVTCVIFKKFCRVFNGIFEEVKESTHNCPSSYELFTILWTYFLVMKSRLPTDDLINN
YQLLFSMIDHLYTEMSSLQDGIVYHLNQEFVGNLIDKDCTILRALCTNFGGSVLDTRHFY
QHTYKKMDKTGLPTSWDFAEFRDEILNAPKDAYVSYLLQRGSIDERVFIPSPEDFSMVFK
DQFVAANVLKISHTGRLFVDAEFLNTISNNQCLEKLSHGKAGLEKLSQGREKPKVPCVEY
NLELGQYPEDDVSNQAHERLVRIIGGWKLERSKLKEMCERMSDSPMATILLKSDELTSEF
ERTLFEERGESSQMTFMTNFHLDLRKELEKVFLIFMEKIIVAEVAKKVREEDLVNVVRRE
EFLNSVFCFCVELVLFSNGYDRPFPWSADVCNCHPFMFHKVIDLMISHEKRLSRQMVQHF
SRIEENVIEYYAWKSDSPLWQMVVRCPFANFQEFGEDWADKLNTYSPMKFTPLKKSSDEL
RDELGRPIVPQNQTSRTLRIFLKRTYFTAARRLQELTDRIAMATRPKSQCWSVFDYLLRN
DTLIFMDRHLDQIILCCVFVIMRMHGSSITFHEIMGQYRRQSSSAMYVYRNVSVFRDQVD
EDNPVPVNLKETISERLEAPPKSKTTVDVIKYYNIEFLERIKHIVKQIDTALDEDLMEMP
IPTSHGLAPVRVYLTQNVSIQVLPRTQYKESRQERAISHLERNGRTLENALSNANE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcgcaaccgatgatcccggaacgtcgtcgacaaaccccgactccgaacat
agcccatatgaggatctcactgaatcatcacaattctcttctccttctggcgaaccggct
ccgaaacggatggatatcgacattaaggaagaactcaacgagagtaatcctgaacctaat
gcggctttgaatccagcgaatatcaagttggagtctgataaccgagaagaaggagaggag
gacgaagaggaagaagatggaaactctcaatcacctatagctgtgctggaagacgatgaa
gaagatgaagatgatgctgacagtgtgattgacaagactaatacaccggaaccttctgat
tcctttttggaatgctgtaccaaagcaaatcttccaagtgaaattactgtagcttcatgg
gaaatatattatcatgcagttcaacgagtatcccttgaggtaagtggaaaaaagtgtttt
cagggttcggaggcggcatggcagctctcggctatctactactatctgctctcgaaaggt
ataaaacgtcgtggaaaagcgagccgacttctcactcaaccattcccaatatcgatactc
actattgctaatactttcgatgtttccgttgcggagcttattgacaagacgacccggttt
gcggaaatcattcattcgaggaagatgcgtcggtatttggaatacattcgaaggctacag
gaaggactcgctgtgacttgtgtgattttcaaaaagttctgtagagtgttcaacggaatc
ttcgaagaggtcaaagagagcactcacaactgtccctcgtcttatgagctgttcacgatc
ctatggacttattttcttgtgatgaaaagccgattacctacagacgacttgattaataac
taccagcttcttttctctatgatagatcatctctacacagaaatgagctcacttcaagat
ggaatcgtctaccatctcaatcaggaattcgttggaaatcttatcgataaggactgtact
attcttcgggctctgtgtacaaatttcggtggtagcgttctagacacgagacatttctac
caacatacatataagaaaatggacaagacgggattgcctacttcgtgggattttgcagag
ttccgagacgagatcttaaacgcaccgaaagatgcctatgtcagttatctcttgcaacgc
ggaagtatcgatgaaagagtctttattccctctccagaagacttttccatggtattcaaa
gatcaatttgtagcagccaatgttttgaaaatctcacatacgggaaggttgtttgtggat
gccgaatttttgaataccatctcgaacaaccaatgtctggagaagttatcacatggtaaa
gcgggcctggagaagctgtcccaaggacgagaaaaaccgaaagtgccgtgtgtagagtac
aatctagagttgggacaatatccagaagacgatgtatccaatcaggcacacgaacgactt
gttagaataattggtggctggaagctggaaagatcgaaactcaaagaaatgtgcgaacga
atgtctgacagtccgatggcaacaattctgttgaaatccgatgagctaacatctgaattc
gagcggacattgtttgaggaacgcggagaatcatctcaaatgacattcatgactaatttc
catcttgatcttcgaaaagagttggagaaggtgtttttgatttttatggaaaaaataatt
gtagcggaggtggcgaaaaaagttcgcgaagaagaccttgtgaatgttgtccgccgtgaa
gagtttctcaattcggttttctgcttctgcgttgagcttgttctattttccaatggttac
gatcgaccctttccatggagtgctgatgtatgcaattgtcatccatttatgttccacaaa
gttatcgacctaatgataagtcatgagaagcgtctcagtcggcaaatggttcaacacttc
agtcgaatagaagagaatgtgatcgaatactatgcatggaagagtgatagcccgctgtgg
caaatggtagttcgatgcccattcgcaaacttccaggaattcggagaagactgggcagat
aaattgaatacctattcacccatgaagttcactccattaaaaaagtcgtccgatgaacta
cgagacgagcttggacgcccgattgttccccaaaatcaaacttccagaactctccgaatt
ttcctgaaaagaacatacttcacagctgctcgaagacttcaggagttaacagatcgtata
gcgatggctacacgtcccaaatcacaatgctggtccgtcttcgactatcttttacgcaat
gacactcttatattcatggatcgccaccttgatcaaataattctatgctgcgtttttgtt
ataatgagaatgcacggttcctcgattactttccacgaaatcatggggcagtatcggaga
cagtcgagcagtgccatgtatgtctatcgcaatgtttctgtattccgtgatcaggtggat
gaagacaatcctgtcccagtcaacttgaaggaaaccatttcggaacgtcttgaagcgcca
ccaaagtccaaaacaacagtcgatgtcatcaaatactacaatattgagtttctggaacgt
ataaagcatatagtgaaacaaattgacactgctctggatgaggatttgatggaaatgcca
ataccaacatcgcatggattagctccagttcgagtttatctaacccaaaacgtttcaatc
caagtgctgccgcggacacagtacaaagagtcgaggcaggagagagctatatcccatctt
gaaagaaacgggcgaacccttgaaaatgctcttagcaacgctaatgaatag
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