KEGG   Caenorhabditis briggsae (nematode): CBG_04066
Entry
CBG_04066         CDS       T01054                                 
Name
(RefSeq) Protein CBG04066
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cbr03000]
    CBG_04066
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_04066
Transcription factors [BR:cbr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    CBG_04066
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     CBG_04066
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 8581464
NCBI-ProteinID: XP_002639471
WormBase: CBG04066
UniProt: A0AAE9IXS0 A8WW49
LinkDB
Position
I:4372699..4374903
AA seq 689 aa
MSSLEFTGIFTENGGVLTPGTLKVEDTSAIFKSDKAGKTIKLSPGDIKDIRWQKLGNRPG
IRFGLKDGGSHRFGGFKEADFGKILVVTESSWGLGIEKTNLVIKGWNYGNVQVKGKNVEF
SWENNPIFEIPCTNVSQCVANKNEAVLEFHQHENNPISLMEMRFHMPVDPENEDDIDRVE
EFKQAVLAYAGLEAETEQPITLLSDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKTI
TRLFLVPHKDGRHVYFVLALNPPIRQGQTRYTYLVFEFVKDDDQEMEIALTDDLKEKYGG
QLKSEMDGPLYENVSILFKVVCNLKVTVPGRFIGSSGTPAIQCSHKQNPGLLYPLEKGFL
FIHKPVMYIRLEEISSCHFARSDAGTVTRTFDFEIDMKSGQSVMFNAMEKEENHKLFDYL
NKKEIKIRNSQRLEKNQHVDSSDDEIDPYTNTVKAEGRGREESDDDESTDEDYDLDKDIK
NQKKDRDSSEGSGSEPDDEYDSGSEKDSSGTGESEPDDENVRPKKKSEVNSEKKSKKEKP
EKVGKKRKGKKEKDPNEPKRAATAYFLWFNANRASLKEDGDTVPEVAKKGGAKWKEMSAD
DKKEWEQKAAQDKIRYENEMKEYKKNGGGSSSVTSNPPKKGTSSPSKYKSKEHISDSDDS
DDDEPPKQKKSSKEATPTDESDMASDNSD
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgagcagcttggaattcaccggcattttcacagaaaacggaggtgtcttgacaccagga
accctaaaagtcgaagatacttcagcgatcttcaaaagtgacaaggcaggaaaaactatc
aagctctcaccaggcgatatcaaggatattagatggcaaaagctgggaaaccgacctggt
attcgtttcggacttaaagatggaggttctcatcgtttcggaggttttaaagaagcggac
ttcggcaaaattttggtggtaaccgaatcttcctggggactagggatcgaaaaaactaat
cttgtgatcaaaggatggaattatggaaatgtacaagtgaaaggaaagaacgtcgagttc
tcttgggaaaacaatcctatttttgaaatcccatgtacgaatgtttcgcagtgcgtcgct
aacaaaaatgaagccgttctggagttccatcaacacgaaaataatccgatttctttgatg
gagatgagattccacatgcctgttgatcctgaaaacgaagacgacattgatcgagtggaa
gagttcaagcaagccgtcctcgcatatgcaggtctcgaggctgagactgaacaaccgatc
acacttctctccgatatcctgtgcacaacgccacgtggacgttatgatatcaaggtctat
ccgacgagcattgccttgcacggaaaaacatacgactacaagattccagtcaaaactatt
actcgactcttcctggttcctcacaaagatggacgacatgtgtattttgtgcttgctttg
aatcctcctattcgtcaaggacaaactcgctacacttatctcgttttcgagtttgtcaag
gatgatgatcaagaaatggagatcgcattaacagacgacctcaaagaaaaatatggggga
caactcaagagtgaaatggatggtcccttgtatgagaatgtttcaattttattcaaggtg
gtttgcaatctcaaagtcaccgttcccggaagattcattggcagtagtggaactccagcc
attcaatgttctcataagcagaatcctggacttttgtatccactggaaaagggattctta
ttcattcataaaccagttatgtacatccgacttgaagaaatcagctcctgccattttgct
cgatccgatgccggtactgttacgcgtacctttgatttcgaaatcgacatgaagtcggga
caatcagtgatgttcaacgctatggaaaaggaagaaaatcacaaattgtttgactatttg
aacaaaaaggaaatcaaaattcgcaactctcagcgtctggagaagaaccaacatgtggat
agcagcgatgacgagatcgatccatacacaaacactgttaaagctgaaggacgtggaaga
gaagaaagtgatgatgatgagagtaccgatgaggattacgatttggacaaggatatcaag
aaccagaagaaagaccgtgattcgtctgaaggatctggaagtgagccagacgacgaatac
gactctggatccgagaaagactccagtggaactggtgaatcggagccagacgatgaaaat
gttcgccctaagaagaaaagtgaagtcaactctgagaaaaaatcgaagaaggaaaaacca
gaaaaggtaggaaagaaaagaaaagggaagaaagagaaggatccgaatgagccgaaacgt
gcggctactgcttatttcctttggttcaatgctaatcgggcgtctttgaaagaagatggt
gatactgttcctgaggttgccaaaaagggaggagccaagtggaaggaaatgagcgctgac
gataagaaggaatgggagcaaaaggcagcacaggataagattcgctatgaaaacgagatg
aaagaatacaagaaaaatggcggtggctcatcttctgtgacgtctaatcctccgaaaaag
ggaacatcctctccatcgaagtacaagtctaaggagcacatcagtgattctgacgactcc
gatgatgacgaaccaccgaaacaaaagaagtcatccaaagaagcaacaccaaccgatgaa
tcggacatggctagcgataattctgattaa

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