Caenorhabditis briggsae (nematode): CBG_04086
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Entry
CBG_04086 CDS
T01054
Symbol
Cbr-mei-1
Name
(RefSeq) Protein CBR-MEI-1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbr04812
]
CBG_04086 (Cbr-mei-1)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
CBG_04086 (Cbr-mei-1)
Cytoskeleton proteins [BR:
cbr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
CBG_04086 (Cbr-mei-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_14
AAA_22
IstB_IS21
Vps4_C
AAA_16
TIP49
nSTAND3
Mg_chelatase
AAA_18
AAA_30
ResIII
AAA_28
AAA_19
AAA_7
Parvo_NS1
ABC_tran
NPHP3_N
AAA_33
Sigma54_activat
Zeta_toxin
RNA_helicase
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
8581480
NCBI-ProteinID:
XP_045092580
WormBase:
CBG04086
LinkDB
All DBs
Position
I:4284761..4286317
Genome browser
AA seq
484 aa
AA seq
DB search
MIGDAQTITGYFERAQVAKTMVDDGRWSEAGDLLRQLLTDVRSYKISTSNREDVESKNVS
KLFFLHYMSFLQAFLKALEASMKLVLQNARDEDELHDAMTRQSGSPEPPADPDVWSKPSP
PLPTSSKYNAKKGGTVPKTQPSKSASSAASYAPSAADTKPANPSQGILPPNSAGESFDAS
SYDSYIVQAVRGTMATQTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFRGLRSPWKA
MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSI
IFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGAQHKFDERRVFVLAATNIPWELDEA
LRRRFEKRIFIPLPDLDARKKLIETSMMGTPQSNEINYDELAAKTEGFSGADVVSLCRTA
AINVLRRYDTKSLRGGELTAAMESLKTEPVRNCDFEAALQAVSSSVDPDTMLKCKEWCDS
FGAM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgatgctcagacaatcactgggtacttcgaaagagcacaagttgctaaaaca
atggtcgacgacggtcgatggagtgaagccggagacttgcttcgacagcttctgacagat
gttagaagctacaaaatatcgacgagtaacagagaagacgtcgaatcgaaaaatgtaagc
aagttgtttttccttcattatatgagttttttgcaggccttcttgaaagcgctagaagcc
agtatgaaattggtacttcaaaacgcccgggacgaagatgagcttcacgacgccatgaca
agacaaagtggcagtccagaacctccggcggatccagatgtgtggtcaaaaccatctcct
ccacttccaacatctagcaagtacaatgcaaagaaaggcggaactgtgcctaaaacccaa
ccatcaaaatctgcctcatcagcggctagttatgctccaagtgcagctgacacaaaaccg
gcaaatccttcgcaaggaatcctcccaccaaacagcgctggagaatcatttgatgcttca
tcgtatgattcgtacattgttcaagcagtccgaggaacgatggcgacacagacagaaaac
acgatgtcattggatgatattattgggatgcacgatgtcaaacaagttcttcatgaagcc
gtcacacttcctctgctagttcccgaattcttccgagggcttcgatcgccgtggaaagcc
atggttctcgctggacctcccggaacaggaaaaacgctcattgcacgtgccatcgcctcc
gaatcgagctcgacgttcttcactgtatcatcaaccgacttatcgagtaaatggcgaggc
gactccgagaagattgttcgcttattgttcgaacttgctcgtttttatgctccttcaatc
attttcattgatgagatcgacactcttggaggacaaagaggaaattctggagaacatgag
gctagtagacgtgtgaagtctgaattcttagttcaaatggacggcgcacagcataagttc
gatgaacgccgtgtctttgttcttgcggccaccaacattccatgggagctggacgaagca
ctccgacgacgattcgaaaagagaattttcattccactcccagatctcgatgcacgaaag
aagctcattgaaacatcgatgatggggacaccacaatcgaatgaaatcaattatgacgaa
ttagcggcgaaaactgaaggattctcaggagctgacgtcgtttcgttgtgcagaacagca
gctatcaatgttcttcgaagatatgatacgaaatccctgagaggcggagaactcacagca
gcgatggaatcgcttaaaacggagccagtccggaattgtgacttcgaagcagctctacaa
gcagtctcctctagtgtcgatcccgatacaatgctcaagtgcaaagaatggtgtgactca
tttggtgctatgtaa
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