KEGG   Caenorhabditis briggsae (nematode): CBG_04087
Entry
CBG_04087         CDS       T01054                                 
Symbol
Cbr-npp-2
Name
(RefSeq) Protein CBR-NPP-2
  KO
K14304  nuclear pore complex protein Nup85
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_04087 (Cbr-npp-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_04087 (Cbr-npp-2)
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_04087 (Cbr-npp-2)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CBG_04087 (Cbr-npp-2)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CBG_04087 (Cbr-npp-2)
SSDB
Motif
Pfam: Nucleopor_Nup85 Phage_lysozyme Serum_albumin
Other DBs
NCBI-GeneID: 8581481
NCBI-ProteinID: XP_045092581
WormBase: CBG04087
LinkDB
Position
I:complement(4281212..4283235)
AA seq 614 aa
MTDVGRRYGVAISDSSTVFAYLTDKKDAKKKGLSIFIILFQCINLGDMNIVLVENVSQKR
QILATPNIRRLVIEMYSVFDKCQKGSSPDRCLDTATSCTFSRAYRSVLYNAAIAHSGTDF
MTDFALWSLYEKLWFGRGDSSICADMVSWANETFTFSKEAMDTAADDLTPGKAPSEEFWR
GVAITLLSSNFNDCIELLVLLGKNPELEAFIDVLSFFNPENLSDEALSDTVNEWKDLMRE
NLASGKYGNNENLKYLTKLLLGDDRYLQSVAPRVLQHWWHFLPFFVLVKNPFAGHAELMD
LAIECRSWFVGEEEENAREKDVFWCLIAKDDNNFLQLISSNPWLAVHLVDLIQKSTLDPE
FEVMRRMQMLDYASVLISHSPLWEIGFGYLIACGTEGLLRLESHIEGMHIEDDEMAEQLL
EICESNRLEDSKSCVTNTMTIRYLKQNEWSAALSWALKTGSKKTIDWTVSRIVSSSSKDE
LAALRVLSSITNNSVLSLPSLTFLYSYQRFVKMMHSGDVLDCVQNLIPLIMMPDVPTQYY
YDLFGYLITIIKEDGRTGIPFSKEILYELSTFLSTFTLDKSRTLNDSYMRKVKTLKKMVL
LKLADSVAKGIGCT
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgaccgatgttggtcgcagatacggtgtggctatcagcgactcttcaacagtttttgct
tatttaaccgataaaaaagatgccaagaaaaaaggtttgtccattttcataattctgttt
caatgtataaatttaggtgatatgaatatcgtcctggtagagaatgtatcacagaaaaga
caaattttggccacaccgaacatcagaaggctggtcatcgagatgtattccgttttcgac
aaatgccagaaaggttcatcacccgacagatgtcttgatacggcgacttcttgtacattt
tctcgagcatatagatctgttctctacaatgcagcgattgcacattccggtacagatttc
atgacagatttcgcactctggtcactgtatgaaaaactttggtttggaagaggtgacagt
tcaatatgtgctgatatggtttcttgggccaacgaaactttcacgttctctaaagaagct
atggatacagctgctgatgatctaacaccaggaaaagctccttcagaagaattctggaga
ggtgtcgctatcacacttctaagcagcaatttcaatgactgcatagagcttttagttctt
cttggaaaaaatccagagttggaggcttttattgatgtactctcttttttcaatccggaa
aatttatcagacgaggctctatcagataccgtaaacgagtggaaagatctaatgagggaa
aacttagccagcggaaaatacggaaacaacgagaatctcaaatatctcacaaaactgctt
ctcggggatgatcgttatttgcaatcggtagcgcctcgagttcttcaacactggtggcat
tttctaccgttctttgtactcgtaaagaatccgtttgctggacatgccgagctcatggat
ttggctattgagtgtcggtcgtggttcgttggagaagaggaggaaaatgctagagaaaag
gatgttttctggtgtcttatagctaaagacgacaacaatttcctacagctaatctcttcg
aatccatggttggcagtccatctcgtggatcttattcaaaagtcaactcttgatcctgag
tttgaggttatgagaagaatgcaaatgctcgactacgcaagtgtgttgatttcacattca
ccactatgggaaatcggattcggatatcttatcgcctgtgggacagagggacttcttcgt
ttggagtctcatatcgaagggatgcatattgaagacgacgaaatggctgaacaacttctt
gaaatttgcgaatcgaatcgtttagaagattcaaaaagctgcgtaaccaatacgatgacg
attcgttatttgaagcagaatgaatggagtgctgcactttcatgggctctcaaaaccggt
tccaaaaaaacaatcgactggactgtatcacgtatagtcagttcaagttcgaaagacgaa
ttggccgctcttcgagtgttgtcatcaataaccaataactcggttctgtctctcccatca
ttgaccttcctctattcgtaccaaagatttgtcaaaatgatgcatagtggagatgttctg
gattgtgttcaaaatctaattccacttattatgatgcctgatgtgccaactcagtactac
tacgatcttttcggctatttgatcaccattatcaaagaagacggacggactgggatccca
ttctctaaagaaatcctctatgaactttcgacatttctctccacattcacactcgataag
agcagaacattgaacgatagctacatgagaaaggtgaaaactctcaagaaaatggtcctt
ctgaagcttgcggattcggtggcaaaaggaattggttgtacttga

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