Caenorhabditis briggsae (nematode): CBG_04175 Help Entry CBG_04175         CDS       T01054                                  Symbol Cbr-vbh-1 Name (RefSeq) Protein CBR-VBH-1   KO K11594   ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] Organism cbr  Caenorhabditis briggsae (nematode) Brite KEGG Orthology (KO) [BR:cbr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cbr03019]     CBG_04175 (Cbr-vbh-1)    03041 Spliceosome [BR:cbr03041]     CBG_04175 (Cbr-vbh-1)    03036 Chromosome and associated proteins [BR:cbr03036]     CBG_04175 (Cbr-vbh-1) Enzymes [BR:cbr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      CBG_04175 (Cbr-vbh-1) Messenger RNA biogenesis [BR:cbr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      CBG_04175 (Cbr-vbh-1)    mRNA cycle factors     Common to processing body (P body) and stress granule      CBG_04175 (Cbr-vbh-1) Spliceosome [BR:cbr03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     CBG_04175 (Cbr-vbh-1) Chromosome and associated proteins [BR:cbr03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     CBG_04175 (Cbr-vbh-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C CMS1 ERCC3_RAD25_C Motif Other DBs NCBI-GeneID:  8581539 NCBI-ProteinID:  XP_045092605 WormBase:  CBG04175 LinkDB All DBs Position I:complement(4135200..4137625) Genome browser AA seq 692 aa AA seqDB search MNTQYYASHNGQQHQGQSWSSYSQQQPGNVAAGGFYNGGFGQNGSPSNGYAIQQSMVPTG MGQMVPSQQAGYIPPYFSAPQQFQLGYSENFDNFDENGSNGYNYSDSGNGYNNNGGETNG WGGAGAEYTENNLFHRTNSGINFDKYENIPVEVSGDSVPAAIENFSDAGFGPAVMENVTR SGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFLLPIIQHIMAGGPDMIKTVSSAT NIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIHKEAAKFSYKTNLQTAILYGGRE NYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCRYLVLDEADRMLDMGFEPQIRKI VGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVFLAVGRVGSTSENIEQRLLWVNE MEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNL EMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDSDEYVHRIGRTGRCGNLGIATSF FNDKNRGIGRDLKTLIMEANQEVPEWLHQVAAEGRIGGGQRGGNRRFGATDYRRGNGGGS FGGNFNSYNSGAASAGFGGGSGFGGSFGGQQRRPFTNGGFGAHSSLSSTSNGGFGGPRRG GFNNGMNRQNGGNFYSNGSQQAPIDHWQAPRA NT seq 2079 nt NT seq  +upstreamnt  +downstreamnt atgaatacacaatattacgcgagtcacaacggccaacaacatcaaggtcaaagctggtcg tcgtattctcaacaacaaccaggaaatgtggctgcaggcggcttctacaatggcggattc ggtcagaacggaagtccgtcaaacgggtatgcaattcaacagtctatggttccaacgggg atggggcaaatggtgccttcacaacaagcaggatatattcctccttatttctcagcgccg cagcagtttcaattgggctattctgaaaacttcgataacttcgatgaaaatgggtccaat ggatataactactccgatagtggaaacggctataataataatggaggggaaacaaacgga tggggaggagctggtgccgaatacaccgagaacaacttgtttcatcgtaccaatagtggc atcaacttcgataagtacgaaaatattccggtagaagtcagtggcgattctgtcccggca gctatcgaaaatttctccgatgctggtttcggacctgctgttatggaaaacgttactcgt agtggctacacgaaaccgactccagttcaaaagcattctattccgactttgctcttcaac cgtgacctgatgtcatgtgctcaaactggttccggaaaaacggctgctttcctccttcca attattcagcatattatggctggaggacctgacatgatcaagacagtaagttctgcaaca aatatttttggtttcaaagtgattttacagcctacattcaacaacggtcgccgcacttac tatccttcggctttagttttgtcaccaactcgcgaattggctattcaaattcacaaagaa gccgccaagttcagttacaaaaccaatttgcagacagctattctttacggtggacgcgag aattatcgcgatcaggtcaaccgcctccgcagcggagtacatattttaatcgctacacca ggacgcctaattgatataatcgaacaaggattcattggtctttctggatgtcgttacctt gttttggacgaagctgaccgcatgcttgatatgggattcgagccgcaaatccgaaagatt gttggtcaaggaatgccaccgaagactgctcgtactactgccatgtttagtgctacgttc ccgaaggagatccaacttcttgccaaagatttcctcaaagaaaactacgtgttcctggca gttggtcgcgttggatcaacatctgagaacatcgaacagcgtctattgtgggtcaacgag atggagaaacggcaaaatctcatggacatccttatgaacgaagacgcaacgaacttggtt ctcgtctttgtggaaacgaaaagaggagccaacgagttagcatatttcttgaatcgccag caaattcgttcagtttctattcacggagatctgaagcagatcgaacgcgaaagaaatctg gaaatgttccgctctggacagttcccgattctggtagctactgctgttgctgctcgtgga ttggatatcccaaatgttcgccacgttgtcaactacgaccttcctggagattctgacgaa tacgtccatcgtattggaagaactggaagatgtggaaacttgggaatcgctactagcttt ttcaatgacaagaacagaggaatcggtcgcgacctgaagacattgatcatggaagcgaat caagaagtccctgagtggcttcatcaagttgcggcggaaggacgcattggcggtggacag cgcggtggaaatcgtcgtttcggagctacagactatcgtcgtggaaacggaggcggatcg ttcggaggaaatttcaattcatacaattctggagctgcttccgctggctttggaggaggc agtggctttggaggttcgttcggcgggcagcaacgtcgcccattcaccaacgggggtttc ggagcccatagctcgctttcgtcaacttccaacggtgggttcggaggaccaagaagaggt ggtttcaacaacggaatgaatcggcaaaatggaggaaacttttattcgaacggttctcaa caagctccaattgatcactggcaagctcctcgtgcttaa

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