Caenorhabditis briggsae (nematode): CBG_04218
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Entry
CBG_04218 CDS
T01054
Symbol
Cbr-nxt-1
Name
(RefSeq) Protein CBR-NXT-1
KO
K14285
NTF2-related export protein 1/2
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
cbr03013
Nucleocytoplasmic transport
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CBG_04218 (Cbr-nxt-1)
03015 mRNA surveillance pathway
CBG_04218 (Cbr-nxt-1)
03008 Ribosome biogenesis in eukaryotes
CBG_04218 (Cbr-nxt-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_04218 (Cbr-nxt-1)
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_04218 (Cbr-nxt-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CBG_04218 (Cbr-nxt-1)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CBG_04218 (Cbr-nxt-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
NXF_NTF2
Mtr2
Motif
Other DBs
NCBI-GeneID:
8581574
NCBI-ProteinID:
XP_002639581
WormBase:
CBG04218
UniProt:
A0AAE9J2K9
A8WWF9
LinkDB
All DBs
Position
I:4012307..4012931
Genome browser
AA seq
139 aa
AA seq
DB search
MAMKTTQDINKDDEELCKEAEKFMQVYYDVMDRKREKIGFMYATISQSNAVWNGNPINGF
DDICRFMAALPSTQHNIQSLDAQRLPEGVSGDMSGGMILHVAGSVTVDSDAQRAFTQTLV
LGVEDGKYKVKSDRFRYVD
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaaaactactcaagatatcaataaagacgacgaagagttgtgcaaagaagca
gaaaagttcatgcaagtatactatgatgttatggatagaaaacgagaaaaaattggattt
atgtacgccaccatctcgcaatccaatgccgtttggaatggaaaccctattaatggattc
gacgatatttgtcgctttatggcagctctgccaagtacacagcacaacattcaatcactg
gacgctcaacgacttcctgaaggtgtttctggagatatgtctggtggcatgattctgcac
gtggcgggatcagtaacagtcgacagtgatgctcagagagcattcacacaaactctcgtt
ctcggagtggaagacgggaaatacaaggtgaagagtgatcggttccgatatgtcgattga
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