Caenorhabditis briggsae (nematode): CBG_04236
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Entry
CBG_04236 CDS
T01054
Symbol
Cbr-pop-1
Name
(RefSeq) Protein CBR-POP-1
KO
K04491
transcription factor 7-like 2
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
CBG_04236 (Cbr-pop-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_04236 (Cbr-pop-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
CBG_04236 (Cbr-pop-1)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
zf-His_Me_endon
Motif
Other DBs
NCBI-GeneID:
8581590
NCBI-ProteinID:
XP_045092618
WormBase:
CBG04236
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Position
I:complement(<3954647..>3957471)
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AA seq
439 aa
AA seq
DB search
MMADEELGDEVKVFRRDEDADDDPMISGETSEQQLADDKKDAVMEAELDGAGRVPLIGGL
KAEIKAEPSPSFPMPSMLPCGPYSPFSGLPIMFPMVVPQYLSPNPNINMMNMMTMRAAMA
GAPLSPAFPAMFSPNPLFPFPGVVAKQHLENTMPMHMRAGPLSSLNHMKMPPYMPHQMMP
QHNERRGHGGGKVKKEDHIKKPLNAFMWYMKENRPKLLEEVGNDQKQSAELNKELGKRWH
DLPKEEQQKYFEMAKKDRESHKEKYPQWSARENYAVNKKKPKRKRDKSVVSGSENNDQKK
CRARFGVTNTSMWCKPCQRKKKCIYATDRSGSELNDGHDGRGTSGGCSSSSESSSPNNNQ
PMPMNAPQTVAAMHAMLMGMQIGQSAHLASSHSTGSSGTSPPVANPSDSESDVDEDEDID
PTITQQTQEYIMQESVCTL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgacgaagagctcggcgatgaggtgaaggtgtttcgccgagatgaagacgct
gacgatgatcctatgatcagtggagaaacgtcagagcaacagcttgcagatgacaaaaaa
gatgcagtgatggaagcagaattggacggtgctgggcgagttccgttgattggtggcttg
aaagcggaaattaaagcggaaccgtctccctcgttcccgatgcccagcatgctgccttgt
ggtccgtacagtccgttttctggattgccgataatgtttcctatggttgtgccacagtac
ttatcgccgaatccaaatatcaacatgatgaatatgatgacgatgcgagcagctatggca
ggcgccccattgagtcctgcgtttccagccatgttctcgccgaatccattgttccccttc
cctggagttgtagctaagcaacatcttgagaatacgatgcctatgcatatgcgagctgga
ccattatcctcattgaatcacatgaaaatgcctccatacatgcctcaccaaatgatgcca
caacacaatgagcgaagaggacatggaggaggcaaagttaagaaagaggatcacatcaaa
aagccactgaacgctttcatgtggtatatgaaagagaacaggccaaagttgctggaggaa
gttggaaatgatcagaagcagagtgcagagctgaacaaagaacttggaaagaggtggcat
gatttgccgaaagaagaacaacagaagtactttgaaatggctaaaaaggatcgggaatca
cacaaggaaaagtatccacagtggtcggctcgggaaaactacgccgtcaacaagaaaaag
ccaaagagaaagagagataagagcgttgtttcaggatctgagaataacgatcagaagaaa
tgtcgagctcggtttggagtgacgaatacatcaatgtggtgcaagccgtgccagcgaaag
aagaagtgcatatatgccacagatcgttccggttccgaattgaatgacggacatgacggc
agaggtacaagtggcggatgcagtagtagctcagagtcttcatctccgaacaataatcaa
ccgatgccaatgaacgctccacaaacggtagctgcgatgcatgcgatgctaatgggaatg
caaattggtcagtctgctcatcttgcatcgtcccattcaacgggatcttctggaacaagt
ccaccggtcgcgaatccctcagattctgaatcggacgttgatgaagacgaggatatcgat
ccaacgatcacgcagcagacgcaagaatacattatgcaggaatctgtttgtactctttaa
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