KEGG   Caenorhabditis briggsae (nematode): CBG_04236
Entry
CBG_04236         CDS       T01054                                 
Symbol
Cbr-pop-1
Name
(RefSeq) Protein CBR-POP-1
  KO
K04491  transcription factor 7-like 2
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CBG_04236 (Cbr-pop-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cbr03000]
    CBG_04236 (Cbr-pop-1)
Transcription factors [BR:cbr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    CBG_04236 (Cbr-pop-1)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 zf-His_Me_endon
Other DBs
NCBI-GeneID: 8581590
NCBI-ProteinID: XP_045092618
WormBase: CBG04236
LinkDB
Position
I:complement(<3954647..>3957471)
AA seq 439 aa
MMADEELGDEVKVFRRDEDADDDPMISGETSEQQLADDKKDAVMEAELDGAGRVPLIGGL
KAEIKAEPSPSFPMPSMLPCGPYSPFSGLPIMFPMVVPQYLSPNPNINMMNMMTMRAAMA
GAPLSPAFPAMFSPNPLFPFPGVVAKQHLENTMPMHMRAGPLSSLNHMKMPPYMPHQMMP
QHNERRGHGGGKVKKEDHIKKPLNAFMWYMKENRPKLLEEVGNDQKQSAELNKELGKRWH
DLPKEEQQKYFEMAKKDRESHKEKYPQWSARENYAVNKKKPKRKRDKSVVSGSENNDQKK
CRARFGVTNTSMWCKPCQRKKKCIYATDRSGSELNDGHDGRGTSGGCSSSSESSSPNNNQ
PMPMNAPQTVAAMHAMLMGMQIGQSAHLASSHSTGSSGTSPPVANPSDSESDVDEDEDID
PTITQQTQEYIMQESVCTL
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgatggccgacgaagagctcggcgatgaggtgaaggtgtttcgccgagatgaagacgct
gacgatgatcctatgatcagtggagaaacgtcagagcaacagcttgcagatgacaaaaaa
gatgcagtgatggaagcagaattggacggtgctgggcgagttccgttgattggtggcttg
aaagcggaaattaaagcggaaccgtctccctcgttcccgatgcccagcatgctgccttgt
ggtccgtacagtccgttttctggattgccgataatgtttcctatggttgtgccacagtac
ttatcgccgaatccaaatatcaacatgatgaatatgatgacgatgcgagcagctatggca
ggcgccccattgagtcctgcgtttccagccatgttctcgccgaatccattgttccccttc
cctggagttgtagctaagcaacatcttgagaatacgatgcctatgcatatgcgagctgga
ccattatcctcattgaatcacatgaaaatgcctccatacatgcctcaccaaatgatgcca
caacacaatgagcgaagaggacatggaggaggcaaagttaagaaagaggatcacatcaaa
aagccactgaacgctttcatgtggtatatgaaagagaacaggccaaagttgctggaggaa
gttggaaatgatcagaagcagagtgcagagctgaacaaagaacttggaaagaggtggcat
gatttgccgaaagaagaacaacagaagtactttgaaatggctaaaaaggatcgggaatca
cacaaggaaaagtatccacagtggtcggctcgggaaaactacgccgtcaacaagaaaaag
ccaaagagaaagagagataagagcgttgtttcaggatctgagaataacgatcagaagaaa
tgtcgagctcggtttggagtgacgaatacatcaatgtggtgcaagccgtgccagcgaaag
aagaagtgcatatatgccacagatcgttccggttccgaattgaatgacggacatgacggc
agaggtacaagtggcggatgcagtagtagctcagagtcttcatctccgaacaataatcaa
ccgatgccaatgaacgctccacaaacggtagctgcgatgcatgcgatgctaatgggaatg
caaattggtcagtctgctcatcttgcatcgtcccattcaacgggatcttctggaacaagt
ccaccggtcgcgaatccctcagattctgaatcggacgttgatgaagacgaggatatcgat
ccaacgatcacgcagcagacgcaagaatacattatgcaggaatctgtttgtactctttaa

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