Caenorhabditis briggsae (nematode): CBG_04291
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Entry
CBG_04291 CDS
T01054
Symbol
Cbr-tag-151
Name
(RefSeq) Protein CBR-TAG-151
KO
K14799
pre-rRNA-processing protein TSR1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_04291 (Cbr-tag-151)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CBG_04291 (Cbr-tag-151)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
eEFSec_4th
Motif
Other DBs
NCBI-GeneID:
8571874
NCBI-ProteinID:
XP_002630359
WormBase:
CBG04291
UniProt:
Q61WR2
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Position
II:complement(5043253..5047425)
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AA seq
788 aa
AA seq
DB search
MSTTGHRAGVFKKPAKPHKSWKGKRTKGEITTENRGREGVKQLTRSAHSTHRAVSKDARR
NQLKMARDRKMADAMERRRTSNAPCLVTILSLGVGARPSEFLKKLATCDETIVQTHSPST
IDFAIPRFKSRISFLTPDKENVDSVLDAIRASDVLCFLWPLSAELSEWDEQLLTICKAAG
LPTIVSVVPGLGGIQNHKKKEDVRKGIEFTISKWSMSNAGVMPADSVTDNLQLLRTLNET
KKKPLTLQARHSYMLVENLEATESPEDSSKITLKAQGYLRGPEWNANNLIHLPGFGDFQI
SKIETAADPHPLKTSPPKGAEVIAKADEKRQSLETEITLDAMDGEQTWPTQEELEEADKE
MRRVPKGTSSYQAAWILDDSEDDEDEEDEDEDMDDEEEDKDLEEDDEEEDTPMDLKSEAG
ETTASEMMFHDEIDEDINLAEVEKYRKERENAQWPDEVDTPIDQPARIRFQKYRGLKSFR
TSTWDAKENLPVDYARIFQFANYKNTKKNVMSKIGGNDVDAGDAVIDKKFNGVFASVYIE
NVPVSVMEAYKETKNLVLFQLLPHEQKMSILNMVLKKHPSCTVPIGSEDQKFIFYVGFRQ
FEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKGRQELVATG
SVLDTNPDRIVLKRTVLSGHPYKINRRAVVVRYMFFNREDIDWFKPVELYTPSGRRGHIK
EAVGTHGHMKCRFDQQLNAQDSVMLNLYKRVFPVWDYSLFNRNLNPSRFVERSRVESISL
VQEDAMEE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaactggccatcgtgcgggagtcttcaagaagccggcaaagccgcacaagtcg
tggaagggaaaacgtacgaaaggagagatcacaaccgagaatcgaggccgcgaaggcgtc
aaacagctcactcgctccgcccactccacgcatcgtgccgtctcaaaagacgctcgtcga
aatcagctcaaaatggcgagagatcgaaagatggctgatgcgatggagagacgcagaacg
tcgaatgctccgtgtcttgtgacaatcctatcccttggcgtcggtgcccgcccctcagaa
ttcctcaaaaaattggcgacgtgcgacgaaacaattgtccaaacgcactccccatccacc
atcgacttcgcgattccacgtttcaaatcgcgaatctccttcctgactccagacaaggag
aatgtcgattccgttcttgacgccatccgcgcttccgacgtcctctgcttcctatggcct
ctttcggcggaactctctgaatgggatgagcaattgctcacgatttgcaaggccgctggt
ctcccaacaatcgttagtgttgtcccaggactcggtggaattcagaatcataagaagaaa
gaagacgtgagaaaaggaatcgagttcactatttcgaaatggagcatgagcaatgctgga
gtgatgcctgcggattctgtcactgataacctccaattgcttcgaactctgaatgaaact
aaaaagaagccgttgaccctccaagctagacactcctatatgcttgttgagaatctggaa
gccactgaatctccagaagattcttctaaaatcactttaaaggctcagggatacctcaga
ggaccggaatggaacgccaacaatcttatccatcttccaggctttggagattttcaaatt
tcgaaaatcgagactgccgctgatccgcatcccttgaagacgtcaccaccgaagggtgca
gaagtcattgcaaaggctgacgagaagcggcagagtttggaaacagagatcactctagat
gcgatggatggagagcagacgtggccaacgcaggaggagttggaggaggctgataaggag
atgcgtcgtgtgccaaaaggaacgtcttcatatcaggcagcgtggattttggatgattcg
gaggatgacgaagatgaagaagatgaggatgaggatatggatgatgaagaagaggataag
gatctagaagaagatgacgaggaggaagacactccaatggatctgaaatcggaagccgga
gaaaccacagcttctgagatgatgttccacgatgaaatcgacgaggacatcaatctcgca
gaagttgaaaagtaccgaaaagaacgagagaacgctcaatggccagacgaagtggacact
ccgatcgatcagccagcgagaattcgtttccaaaagtatcgtggattgaagagtttccgt
acgtctacatgggatgccaaagagaatctaccagtggattacgcgagaattttccaattt
gccaattataaaaatacgaaaaagaatgtgatgtccaagattggagggaacgatgtggat
gctggcgacgcagtgattgataagaaattcaacggagtcttcgcaagtgtctatattgaa
aatgtgcctgtctctgtgatggaggcttataaggagacgaagaatctcgtgctcttccaa
cttctccctcacgaacagaagatgtcgattctgaatatggttctgaagaagcatccatcg
tgtacagtcccgattggttctgaagatcagaaattcatcttctacgtgggattcagacaa
ttcgaagcgcacgctgtgctttcgtcgaatacgcctggggacaagttcaaattggaacga
ttcatgccgacggagaagacgtttgtggctactgtatatgcaccgattacgtttaatccg
gcgacagtgttgtgtttcagacaagatgataagggaagacaggaactcgtcgccactggc
tcagtcctcgacacgaatccggatcgaatcgtcctgaaacgtaccgtactctccggtcat
ccatacaagattaatcgccgtgccgtcgttgtcagatacatgttctttaatagagaagac
attgattggttcaaaccagtggaactctacacgccatcaggacgtcgtggacacatcaaa
gaagctgtcggtactcatggacacatgaaatgtcgattcgatcaacagttgaatgcgcaa
gactcggttatgcttaatttgtataaacgcgtcttccccgtgtgggattattcgcttttt
aatcgcaacctgaatccatctcgtttcgtcgaacgttcgcgtgtcgaaagcatcagcttg
gtccaagaggatgccatggaggaatag
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