Caenorhabditis briggsae (nematode): CBG_04294
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Entry
CBG_04294 CDS
T01054
Symbol
Cbr-rpn-5
Name
(RefSeq) Protein CBR-RPN-5
KO
K03035
26S proteasome regulatory subunit N5
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
CBG_04294 (Cbr-rpn-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cbr03051
]
CBG_04294 (Cbr-rpn-5)
Proteasome [BR:
cbr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
CBG_04294 (Cbr-rpn-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
Motif
Other DBs
NCBI-GeneID:
8571877
NCBI-ProteinID:
XP_002630362
WormBase:
CBG04294
UniProt:
A8WX64
A0AAE9DK17
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All DBs
Position
II:complement(5055850..5057585)
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AA seq
491 aa
AA seq
DB search
MADKREPIPVDPVDIGETTDLDSLAHLAAHGGDGRLFKMEQDYTKQVDEALLKARDLAQK
DVLAAVESLNNIEKLTRLGADMKSNTRVVQYMTKLCFEGQKWDLLMETIMTLSKKRLLIK
MAIAKMVRDAVAMIDKMPSDDLKMKLIETLRTVTAGKIYVEVERARLTSMVVKKLEAEGK
LDEAATMLLELQVETYGSMEMKEKVSYLLEQMRHSLVRNDYVRATIISKKINIKFFNKSD
AEDVQDLKLKYYDLMIRIGLHDGNYLDVCRHHREIYETIKIRADPAKAASHLRSAIVYCL
LAPHNNEQWDLLNRIAIQRELETVPDYKIILDLFINQELISFKGTIVAQYEKLLRRGTPT
SPDTGIFDKSQEGEKRWSDLHLRVGEHNMRMIAKYYTQITFERLAELLDFPVDEMESFVC
NLIVSGQIIGAKLHRPSRIVNLRLKKANVEQLDVWASNVHKLTDTLNKVSHLILKEQMVH
KNLDLSAAPRA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagcgtgagccaattccggttgatcctgtcgacatcggcgagaccaccgat
ctcgacagtttggctcatttggcggctcatggcggagatggtcgtcttttcaaaatggag
caagattacacaaaacaagtagacgaagcgctcctcaaagctcgtgatctggctcaaaaa
gatgttctcgctgctgtagagagtcttaacaatattgagaagctcactcgtcttggtgca
gatatgaagagcaatactcgtgttgttcagtacatgaccaaactttgcttcgaaggtcaa
aaatgggatcttctgatggaaactatcatgacactctccaagaagagacttctcatcaag
atggccatcgccaaaatggttcgtgacgcagtcgccatgatagataagatgccaagcgac
gatctcaaaatgaaactcatcgaaacccttcgcactgtcaccgctggcaaaatctatgtt
gaagttgagcgtgctcgtcttacatctatggttgtcaagaagttggaagctgagggaaag
cttgatgaggccgctacgatgcttctcgagcttcaagtcgagacatatggttctatggag
atgaaagagaaggtttcctaccttttggagcaaatgagacactcgttggttcgcaacgac
tacgttcgtgcaacaatcatttccaagaagattaacattaaatttttcaacaaatctgac
gctgaggatgtgcaagatttgaagttgaagtactatgatttgatgatccgtattggactc
cacgacggaaactatttggatgtctgtcgccaccatcgtgaaatttacgaaaccataaag
atcagagcggatccggcaaaagcggcatcgcaccttcgctcggctatcgtctactgtctt
ctggcacctcacaacaatgagcaatgggatctgttgaatagaattgcgattcagagagaa
ttggaaacagttccggactacaaaatcattctcgatttgtttatcaatcaggaattgatt
tctttcaagggaaccattgtggctcagtacgagaagttgttgagacgtggaacaccgacg
tctccagacactggaatcttcgacaagtcgcaggaaggagaaaagcggtggtcggatttg
caccttcgtgttggagagcataacatgcgtatgatcgccaaatactacacccaaatcaca
ttcgaacgccttgccgagcttctagacttcccagttgacgagatggaatccttcgtttgc
aatctcattgtcagcggccagatcatcggcgccaaacttcatcggccatctcgtatcgtg
aatctgcgtttgaagaaggcaaatgtggagcagttggatgtttgggcgagcaatgtgcac
aaactgacggatacgttgaacaaagtgtcccatttgattctcaaggagcagatggttcat
aagaatttggatctctcggcggcgccacgtgcatga
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