Caenorhabditis briggsae (nematode): CBG_04341
Help
Entry
CBG_04341 CDS
T01054
Name
(RefSeq) Protein CBG04341
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_04341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_04341
Spliceosome [BR:
cbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
CBG_04341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
8571917
NCBI-ProteinID:
XP_002630402
WormBase:
CBG04341
UniProt:
A8WXB3
A0AAE9DN42
LinkDB
All DBs
Position
II:13158224..13163625
Genome browser
AA seq
626 aa
AA seq
DB search
MSREAPEKSPEPETKEERRRSTHEEPAKRSHHDDSDHKHSRRSKDDSKNGKSNGESSHRT
SERDRKRRDRSRSRTRSRSPKRSKRDKKEEKDQEEEDGEIRDTTPPVVEKPRELTARELE
RQRIIQEELKNGEVDEDGDEPVWSMKKAQAEKKSRTCPYLDTIDRSVLDFDFEKQCSVSL
SHQNVYACMVCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLED
IKYVLKPTYTKEMIGSIDKQARMVRAQDDSTYFPGVVGLNNIKANDYCNVILHALSAVRP
LRNWFLKESNYLAVKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSN
KKFQFIKQNDAYDFMLFLLTTLHAALNGSEKRESIISKTFRGRMREYSRKVIPAEDTEEE
KYRKMHLPDYQEKVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEKFDGKTEKE
YRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDLYECLAEDVR
AEHKYTTYDLVANVVHEGTFETGNYRIQIVHQGSGKWFELEDLHVKDMLPQMIVLAESYV
QIWRLNKEKTRDERAEDDGEGQMETA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagaagcaccagaaaagtcaccagagcccgagacgaaggaggaaagacgacga
agcactcatgaggagcccgcgaaacgatctcaccacgatgacagcgatcataagcattcc
agacgatcaaaagatgattcgaaaaatggaaaaagcaacggagaatcgtcgcaccgaact
tcggaaagggatcgcaaaagaagagatcgcagtcgatcgagaactcggtcaagatctcca
aagcgttcaaaacgcgacaaaaaagaagagaaagatcaggaagaggaggatggagagatc
cgcgacacaactccaccagtggtcgagaagccacgtgagctgacagctagggagttggag
agacagagaatcattcaggaggagttgaagaacggagaagtcgacgaggatggtgatgag
ccggtttggtcgatgaaaaaggcgcaggcggagaaaaagagccggacgtgtccttatttg
gatactattgatagatccgtcctggatttcgacttcgagaagcaatgttccgtgtctctc
tcccatcaaaacgtgtacgcgtgcatggtgtgcggaaagtatttccagggtcgtggaacc
aatacccacgcctacacccacgctcttgaaaccgatcaccacgtcttcttgaaccttcaa
acgctgaaattttactgtcttcctgacaattatgaagtcgttgatccatcgctagaagac
ataaagtacgtgttgaagccgacgtatacaaaagagatgattggatcgattgataagcaa
gcgagaatggttcgagctcaggatgattcgacgtattttccgggagtggttggattgaat
aatatcaaggctaatgattattgcaatgttattcttcatgcgctctccgccgtccgtcct
cttcgaaattggttcctcaaggaatccaactacttggccgtcaaacgtcctccaggagac
aagctcacacttctcccacagcgattcggagagttgatcagaaagctatggaatccgagg
gctctccgaacccacgtgtctcctcacgaaatgctccaagccgtcgttgtatgctccaac
aagaagtttcagttcatcaagcagaatgatgcttatgattttatgctcttcctgttgaca
acacttcatgcggcactcaatggatctgaaaagcgggagagtatcatttcgaaaaccttc
cgcggtcgaatgcgtgaatattcccgaaaagtgattccagcagaagacactgaagaagag
aagtaccgtaagatgcacctcccagattaccaggagaaggtttccgagaagcccttcctc
ttcctgaccctcgatctcccagcagccccactctaccgcgatgtccaacttcagaacatc
attccacaagtgccattgagcacacttttggagaaattcgatggaaaaacggagaaagaa
tacaggacatataatgacaacattatgaagagatatgagcttctgaagcttccagaattc
cttatcatctcgtataagagattccagaagaatcaatggtttgtggagaagaatccaacg
atcgttaacttccctatcgccaacgtggatctctatgagtgtttggcagaggatgtgaga
gcggagcacaagtatacgacgtatgatttggtggcgaatgtggttcatgagggaacgttc
gagacgggaaactatcggattcagattgtgcatcagggttccggaaaatggttcgagctg
gaagaccttcacgtcaaagacatgcttccccagatgattgtgctcgccgagtcgtacgtt
caaatttggcggctgaataaggaaaaaacgagagacgagagagcagaggacgatggagaa
ggtcaaatggagacggcttga
DBGET
integrated database retrieval system