KEGG   Caenorhabditis briggsae (nematode): CBG_04341
Entry
CBG_04341         CDS       T01054                                 
Name
(RefSeq) Protein CBG04341
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_04341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbr03041]
    CBG_04341
Spliceosome [BR:cbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    CBG_04341
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 zf-UBP_var
Other DBs
NCBI-GeneID: 8571917
NCBI-ProteinID: XP_002630402
WormBase: CBG04341
UniProt: A8WXB3 A0AAE9DN42
LinkDB
Position
II:13158224..13163625
AA seq 626 aa
MSREAPEKSPEPETKEERRRSTHEEPAKRSHHDDSDHKHSRRSKDDSKNGKSNGESSHRT
SERDRKRRDRSRSRTRSRSPKRSKRDKKEEKDQEEEDGEIRDTTPPVVEKPRELTARELE
RQRIIQEELKNGEVDEDGDEPVWSMKKAQAEKKSRTCPYLDTIDRSVLDFDFEKQCSVSL
SHQNVYACMVCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLED
IKYVLKPTYTKEMIGSIDKQARMVRAQDDSTYFPGVVGLNNIKANDYCNVILHALSAVRP
LRNWFLKESNYLAVKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSN
KKFQFIKQNDAYDFMLFLLTTLHAALNGSEKRESIISKTFRGRMREYSRKVIPAEDTEEE
KYRKMHLPDYQEKVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEKFDGKTEKE
YRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDLYECLAEDVR
AEHKYTTYDLVANVVHEGTFETGNYRIQIVHQGSGKWFELEDLHVKDMLPQMIVLAESYV
QIWRLNKEKTRDERAEDDGEGQMETA
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgtctagagaagcaccagaaaagtcaccagagcccgagacgaaggaggaaagacgacga
agcactcatgaggagcccgcgaaacgatctcaccacgatgacagcgatcataagcattcc
agacgatcaaaagatgattcgaaaaatggaaaaagcaacggagaatcgtcgcaccgaact
tcggaaagggatcgcaaaagaagagatcgcagtcgatcgagaactcggtcaagatctcca
aagcgttcaaaacgcgacaaaaaagaagagaaagatcaggaagaggaggatggagagatc
cgcgacacaactccaccagtggtcgagaagccacgtgagctgacagctagggagttggag
agacagagaatcattcaggaggagttgaagaacggagaagtcgacgaggatggtgatgag
ccggtttggtcgatgaaaaaggcgcaggcggagaaaaagagccggacgtgtccttatttg
gatactattgatagatccgtcctggatttcgacttcgagaagcaatgttccgtgtctctc
tcccatcaaaacgtgtacgcgtgcatggtgtgcggaaagtatttccagggtcgtggaacc
aatacccacgcctacacccacgctcttgaaaccgatcaccacgtcttcttgaaccttcaa
acgctgaaattttactgtcttcctgacaattatgaagtcgttgatccatcgctagaagac
ataaagtacgtgttgaagccgacgtatacaaaagagatgattggatcgattgataagcaa
gcgagaatggttcgagctcaggatgattcgacgtattttccgggagtggttggattgaat
aatatcaaggctaatgattattgcaatgttattcttcatgcgctctccgccgtccgtcct
cttcgaaattggttcctcaaggaatccaactacttggccgtcaaacgtcctccaggagac
aagctcacacttctcccacagcgattcggagagttgatcagaaagctatggaatccgagg
gctctccgaacccacgtgtctcctcacgaaatgctccaagccgtcgttgtatgctccaac
aagaagtttcagttcatcaagcagaatgatgcttatgattttatgctcttcctgttgaca
acacttcatgcggcactcaatggatctgaaaagcgggagagtatcatttcgaaaaccttc
cgcggtcgaatgcgtgaatattcccgaaaagtgattccagcagaagacactgaagaagag
aagtaccgtaagatgcacctcccagattaccaggagaaggtttccgagaagcccttcctc
ttcctgaccctcgatctcccagcagccccactctaccgcgatgtccaacttcagaacatc
attccacaagtgccattgagcacacttttggagaaattcgatggaaaaacggagaaagaa
tacaggacatataatgacaacattatgaagagatatgagcttctgaagcttccagaattc
cttatcatctcgtataagagattccagaagaatcaatggtttgtggagaagaatccaacg
atcgttaacttccctatcgccaacgtggatctctatgagtgtttggcagaggatgtgaga
gcggagcacaagtatacgacgtatgatttggtggcgaatgtggttcatgagggaacgttc
gagacgggaaactatcggattcagattgtgcatcagggttccggaaaatggttcgagctg
gaagaccttcacgtcaaagacatgcttccccagatgattgtgctcgccgagtcgtacgtt
caaatttggcggctgaataaggaaaaaacgagagacgagagagcagaggacgatggagaa
ggtcaaatggagacggcttga

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