Caenorhabditis briggsae (nematode): CBG_04390
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Entry
CBG_04390 CDS
T01054
Name
(RefSeq) Protein CBG04390
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00061
Fatty acid biosynthesis
cbr00071
Fatty acid degradation
cbr01100
Metabolic pathways
cbr01212
Fatty acid metabolism
cbr04146
Peroxisome
Module
cbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CBG_04390
00071 Fatty acid degradation
CBG_04390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CBG_04390
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cbr01004
]
CBG_04390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_04390
Enzymes [BR:
cbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CBG_04390
Lipid biosynthesis proteins [BR:
cbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CBG_04390
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CBG_04390
Exosomal proteins of breast cancer cells
CBG_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8576388
NCBI-ProteinID:
XP_045092663
WormBase:
CBG04390
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Position
IV:complement(11962034..11965154)
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AA seq
785 aa
AA seq
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MAYRGLNLITRQAIVRSTFRHANLLTRNNISLICHDRGFFFGKRREPKCDLKNQSIVQED
GGRKAAWLGDGPLHHGWFDGTLTTYTAIRRGPTVGGKEMLGTRVMKDGKLEWKWITYDQA
IEMSDHVSQAIRKLGIETGEESKIGIYSKNRPEVNSFFSVEASFLFQWVISDMSLHNFSN
VSVPLYDTITNDDMHYITNLCELKMMFVDLEEKTKQLIRDKSYLSTLKYIVQYDKVSPET
KELARENDFQIWSFEEFMEMGKREKPRQHVPPTPETLATISFTSGTTGRPKGVMLTHLNL
CSATMSCDEFDQKEGGDGYLSYLPLAHIYERLCTLANFSIGSKIGFFRGDPTLLMEDIQA
LAPRSVATVPRVIDKIHKGVMKQVVDKPVKRMILKAALTYKLHHYKMTGKATRGTWVDKY
ILNKIQMLLGPNIRQIIIGAAKSDASSLEFMRGAFGIEVLEGYGQTETSGPTTIQLVGDT
RVACVGPPMACCLIKLVDVPDLGYFVNQNGGEILVKGYNVTSGYYKNPDATKSAFTEDGY
MKTGDIGRFTPEGSLQIIDRRKNVFKLPQGKFVAPDLIETLYTSSRFVQQIYVHGDLQKP
WLVAVVVPDPDHLAGYAKLKHGIKGKTYEELCNTPVLAEDCLRHFVQLTEGHKRPRYEGV
YAVHLTPIAFTAQNGLTTPTLKNKRNALSQFFKTDIENMYKKIEATELTELDFRIYNSQN
LKISESQNLKFSSFQNLKTSKALKFRISESSNLINSESPEFQIFIIVETLNVEISKFQIS
KYQST
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcgcggattgaatttgattactcgacaagcgattgttcgttcgacttttcga
catgccaaccttcttactcggaataatatttcactaatttgccacgatcgtggattcttc
ttcggaaagcgtcgtgagccgaaatgcgatctgaagaaccagtcgatagttcaggaagat
ggtggacggaaagccgcgtggctgggagatggaccacttcatcatggctggtttgacgga
acactcacaacatatacagcaatcagaagaggtccaactgttggtggaaaagaaatgtta
gggacgagagtcatgaaagatggaaaactggaatggaagtggattacttatgatcaggcg
attgaaatgtccgatcatgtttctcaggcgattcggaagttggggattgaaacaggagaa
gaatcaaagatcggaatttactccaaaaatcggccggaggtaaactctttcttttcagtg
gaagctagttttctatttcagtgggttatctccgatatgtctctccataacttctcaaac
gtctccgtccctctctacgatacaatcaccaacgacgacatgcactacatcacaaatctc
tgtgagctcaaaatgatgtttgtggatctagaggaaaagacgaaacaacttatccgtgac
aaatcctatctttccactctcaaatacatcgttcaatacgacaaagtctccccggaaacc
aaagaattggctcgtgagaatgacttccaaatatggagtttcgaagagtttatggagatg
ggaaaacgagaaaaaccccgtcaacatgttccgccaacaccagaaactcttgccacaatc
tccttcacttctggaacaactggaagaccaaaaggtgtcatgttgactcatctgaatctg
tgctccgctacaatgtcgtgtgacgaatttgatcagaaggaaggaggagatggatacctc
tcgtatcttccgttggcccatatttatgaacgattatgtacactggccaacttttctatt
ggatcaaaaattggattcttccgcggtgatcccactcttctcatggaagatattcaggct
ctggctccaagatccgtcgccacagttccacgtgtcattgacaagattcacaagggagtc
atgaaacaagtagtggataagccagtgaagagaatgattctgaaagctgcgctcacttat
aagttgcatcattataagatgaccggaaaagctactcgtggaacttgggtcgacaagtac
atccttaataagatccagatgcttctcggtcccaacattcgtcagatcatcatcggagct
gctaaatcggatgcatcctctttggaattcatgcgtggtgcatttggaatcgaagttcta
gaaggatacggtcaaacggaaacatcgggtcccaccacgattcaactcgttggagacacc
cgtgtcgcctgtgtgggtccaccaatggcgtgttgtctcatcaaacttgttgatgttcct
gatctcggatactttgtgaatcagaatggaggagagattctcgttaagggatacaacgtc
acttctggatactacaagaatccagatgccacgaaatcggctttcactgaggatggatac
atgaaaactggagatatcggacggttcacaccagaaggaagtcttcagattattgatcgt
cgaaagaacgtcttcaaacttccacaaggcaaattcgtggcaccggatctcatagagacc
ctttatacttcttcaagatttgtgcaacagatttatgttcatggtgatcttcagaagccg
tggctggtagctgtggtggttccagatccagatcatcttgccggatacgccaaactgaag
cacggaattaaaggaaaaacgtatgaggagttgtgcaatactccagtgctcgctgaagac
tgcctccgtcattttgttcaattgacagaaggacacaagcgaccgagatatgaaggggtc
tacgccgtccatctgacaccaattgcattcacagctcaaaatggactgacgactccaaca
ttgaagaataaacggaacgcgttgtctcaattcttcaaaacggatattgagaacatgtat
aagaagattgaagccactgaactcactgaacttgattttagaatttacaattctcagaat
ctcaaaatttctgaatctcagaatctcaaattctcaagttttcaaaatctcaaaacttca
aaagctttaaaattcagaatctcagaatcttcaaatttaataaattcggaatctccagaa
tttcagattttcataatcgtagaaactctgaacgtcgaaatctcaaagttccaaatttca
aaatatcaaagtacctaa
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