Caenorhabditis briggsae (nematode): CBG_04493
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Entry
CBG_04493 CDS
T01054
Symbol
Cbr-syd-2
Name
(RefSeq) Protein CBR-SYD-2
KO
K26226
liprin-alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_04493 (Cbr-syd-2)
Membrane trafficking [BR:
cbr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CBG_04493 (Cbr-syd-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
ATG16
DUF7626
Motif
Other DBs
NCBI-GeneID:
8586129
NCBI-ProteinID:
XP_045092692
WormBase:
CBG04493
LinkDB
All DBs
Position
X:6502688..6509453
Genome browser
AA seq
1152 aa
AA seq
DB search
MSFSNGTINCDIMPTISEDGVDNGGPLDEPSDRDNIEQVSMCPLMMNMLEDRDKLQEQLE
TVKIQLENQGMRTKEVEKERDMMKRQFEVHTQNLPQELQTMTRELCLHKEQLLEKDEEIV
ELKAERNNTRLLLEHLECLVSRHERSLRMTVMKRQAQNHAGVSSEVEVLKALKSLFEHHK
ALDEKVRERLRAAMERVATLEEEVNGKGEENAALKARIANYAAEAEEALASNARTNGTLS
SESANRLIEMQEALERMKTELANSLKQSNEVTTRNAELEEQIAENAREKHAAQESIARLK
NQICELDAQRTDQDTRIATLESRFLTAQRESTCIRDLNDKLEHQLANKDAAVRLNEEKVH
SLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQE
LTAELERAVQRERMNEEHSQRLSSTVDKLLSESNDRLQLHLKERMQALDDKNRLTQQLDG
TKKIYDQAERIKDRLQRDNESLRQEIEALRQQLYNARTAQFQSRMHALPYAHAPTIVQAP
PPTSIAQQSAYSVYKQPNQQYQTVGMRRNNKGRMAALQDDPNKVQTLNEQEWDRLQQAHV
LANVQQAFSSSPSLADVGQSTLPRPNTAVQQHSQEEMMAMQRGLQQEMQQNMQQGGGQDA
HMLASMLQDRLDAINTEIRLIQQEKHHAERVAEQLERSSREFYDDQGISTRSSPRASPRL
EDMRQHKYNTLPANVTGDRRYDIYGNPQFVDDRMVRDLDYEPRRGYNQFDEMQYERDRLS
PASSVASSTDGLGGKKKRSNSSSGLKTLGRFFNKKKNSSSDLFKRNGDYSDGEQSGTEGT
QKADYDKRKKKKHELLEEAMKARTPFALWNGPTVVAWLELWVGMPAWYVAACRANVKSGA
IMSALSDQEIQKEIGISNPLHRLKLRLAIQEMVSLTSPSAPRAARLTLAFGDMNHEYIGN
DWLPSLGLAQYRSAFMECLLDARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLKKVNY
DKKVLAERRKACENINTDLLVWSNERVQRWVEEIGLGAFSRNLVDSGIHGALIALDETFD
ASAFAYALQVGSQDIANRQVKLQLCSAKIKNEQKLLLEKKFINLVNDHRLQTDSHPRSGS
SIAKSYEFHLYT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagtaatggaaccataaattgcgacatcatgccaacaatctctgaagatgga
gtggacaacggcggtccgctcgatgagccatcggatcgagataatatagaacaggtatca
atgtgtcctttgatgatgaacatgttggaagaccgagataagttgcaggagcagttggaa
actgttaagattcagctggagaatcaggggatgcggacgaaagaagtggagaaagagcga
gatatgatgaagcgacagtttgaagtgcacactcagaatttacctcaggagttacaaacc
atgacacgagaactatgtcttcataaagagcagttattggaaaaagatgaagaaatagtt
gagctgaaggccgagagaaataatacaaggctactgttagaacatttggagtgcttagta
tcccgacatgagcgatccttaaggatgacagttatgaaaagacaagcccaaaatcatgct
ggtgtctcctctgaagtagaagtgctgaaagccctgaaaagtctgtttgaacatcacaaa
gccctcgatgaaaaggtccgtgaacgtcttcgagccgcgatggagcgtgtggcgacactt
gaggaggaagtcaacggaaaaggagaggagaatgcggcgctgaaagctcgaattgccaat
tatgccgcggaagccgaagaggcactggcgtcaaacgcgcgtaccaatggtacactgagt
agtgagagtgcaaaccgactcattgaaatgcaggaagcgttggagaggatgaagacggaa
ctggcgaattctttgaaacaatcgaatgaagtcacaacaagaaacgccgaactcgaagag
caaatcgctgaaaacgctcgtgagaagcatgccgctcaagaatccatagcccgtctgaag
aaccaaatttgtgagcttgatgcccaacgcaccgaccaagatacaagaatagccacgctt
gagtcgcgtttcctgaccgctcaacgcgagtcgacatgcatccgggatctcaatgacaaa
ttggagcatcagctcgccaacaaggatgcggctgtcaggttgaatgaggagaaggtgcat
tctcttcaagaaagattggaattggcagagaagcaactcgcgcagagtctcaaaaaggca
gagtcccttccgtcagttgaagctgaattgcaacagagaatggaggcgcttaccgcagct
gaacagaagagtgtatccgcggaagaacgcattcagaggttggatcggaatatccaggaa
ctcactgcagaattggagagagctgtgcaaagagagcggatgaatgaagagcatagccag
aggctgagtagcactgtggataaactgctatctgaatccaacgaccgcctgcaactccat
ctcaaagaacgaatgcaagcgctggatgacaaaaaccgtcttactcaacagctcgatggc
acgaagaaaatttacgatcaagcagagcgcatcaaagatcgtctacagagggataacgaa
tcgttgagacaagaaattgaagcattgcgacagcagttgtacaacgcaaggaccgcacaa
ttccaatcaaggatgcacgcccttccgtacgcacatgctccaactattgttcaagcacca
cctccgacttcgattgctcagcaaagtgcttattcggtttacaagcaaccaaaccaacaa
tatcaaactgttggtatgaggaggaataataagggacggatggcggcgttgcaggacgac
cccaacaaggtgcaaacactcaatgaacaagaatgggatcgtcttcaacaagctcatgtt
cttgcaaatgtccaacaagcattctcttcctctccatcacttgccgatgttggtcaatcg
acacttccaaggcccaataccgctgtccaacaacactcccaggaagaaatgatggctatg
caacgaggattacaacaagaaatgcaacaaaatatgcaacaaggtggcggccaggatgcc
catatgttggcttcgatgctgcaagatcgattagacgcgattaataccgaaattcgatta
atccaacaagaaaagcatcacgctgaacgagtagccgagcagcttgaaagatcaagtcgc
gagttttatgatgatcaaggaatatctacaagaagttcccctcgagcaagtccccgattg
gaagatatgcgacaacacaagtataacaccctgccggccaatgtcacaggcgaccgccga
tatgacatttatggcaatccccagtttgttgatgaccgtatggtgcgggatttagactac
gagccgcgtcgtggatataaccaattcgatgagatgcaatatgaaagagatcgcttgagt
cccgcgtcatccgtggcttcctcgacagatggtctcggtggcaagaaaaagagatcgaat
agctcaagtggtttgaagacgttaggaaggtttttcaataaaaagaagaattcatcaagt
gacctattcaaaagaaacggagactactcggatggcgagcagtcagggaccgaaggaact
caaaaagctgactatgataagaggaaaaagaagaagcatgaacttttggaagaagcgatg
aaagcgaggactccgtttgcgttatggaatgggccgactgttgtagcttggttggaatta
tgggtcggcatgccagcgtggtatgtggcggcgtgtagggccaacgttaagtcaggagcc
attatgtcagcgttgagtgatcaggagattcagaaggagattgggatttcaaacccatta
catcggctgaagttgaggctcgctattcaggaaatggtttctctcacctctccatcagct
ccacgagccgcccgtcttacgcttgcatttggcgacatgaatcacgaatacatcgggaac
gactggttacccagtctcggacttgcgcaataccgttctgcgttcatggaatgtctcctt
gacgcgcgtatgttggaacatttatcaaaacgcgacctacgcacacatctccgtatggtg
gacacattccatcgaacaagtctccaatacggcataatgtgtctgaagaaagtcaattat
gataagaaagtgttggcggaacggcgaaaagcatgcgagaatattaatacagacttgctc
gtctggtcaaatgaacgagttcaacgatgggtagaggaaattggactgggtgcattttca
agaaatctggttgatagcggaatacacggagcgctgatagccttggatgaaacttttgat
gcttcagcgtttgcatatgcattgcaagtaggatcccaggatatagcaaatagacaggta
aaactacaattatgctctgcaaaaattaaaaatgagcagaagctgctcctcgaaaagaag
ttcattaatctcgtcaacgatcatcgcctccaaaccgactctcacccgaggagtggaagc
tctatagccaaatcctacgagttccatctgtatacctag
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