Caenorhabditis briggsae (nematode): CBG_04588 Help Entry CBG_04588         CDS       T01054                                  Symbol Cbr-hda-1 Name (RefSeq) Protein CBR-HDA-1   KO K06067   histone deacetylase 1/2 [EC:3.5.1.98] Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03082   ATP-dependent chromatin remodeling cbr03083   Polycomb repressive complex cbr04213   Longevity regulating pathway - multiple species cbr04330   Notch signaling pathway cbr04350   TGF-beta signaling pathway Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     CBG_04588 (Cbr-hda-1)    03083 Polycomb repressive complex     CBG_04588 (Cbr-hda-1)  09130 Environmental Information Processing   09132 Signal transduction    04330 Notch signaling pathway     CBG_04588 (Cbr-hda-1)    04350 TGF-beta signaling pathway     CBG_04588 (Cbr-hda-1)  09150 Organismal Systems   09149 Aging    04213 Longevity regulating pathway - multiple species     CBG_04588 (Cbr-hda-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cbr03036]     CBG_04588 (Cbr-hda-1) Enzymes [BR:cbr01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      CBG_04588 (Cbr-hda-1) Chromosome and associated proteins [BR:cbr03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class I HDACs      CBG_04588 (Cbr-hda-1)    HDAC complexes     Sin3A-HDAC complex      CBG_04588 (Cbr-hda-1)     BRAF-HDAC complex      CBG_04588 (Cbr-hda-1)     REST complex      CBG_04588 (Cbr-hda-1)     SHIP complex      CBG_04588 (Cbr-hda-1)     MiDAC complex      CBG_04588 (Cbr-hda-1)    Polycomb repressive complex (PRC) and associated proteins     Noncanonical PRC1 (PRC1.6)      CBG_04588 (Cbr-hda-1)   Heterochromatin formation proteins    Other heterochromatin formation proteins     CBG_04588 (Cbr-hda-1)   Chromatin remodeling factors    NuRD complex     CBG_04588 (Cbr-hda-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl Motif Other DBs NCBI-GeneID:  8579799 NCBI-ProteinID:  XP_002637802 WormBase:  CBG04588 UniProt:  A8WY01 LinkDB All DBs Position V:complement(14571072..14572578) Genome browser AA seq 455 aa AA seqDB search MNSNGPLQEHGKRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRSMEIFRP FPATFDDMTRFHSEEYMLFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGG SLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDID VHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDSS YQSIFKPIMTKVMERFDPSAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLM MVGGGGYTPRNVARCWTYETSIAVDREVANELPYNDYFEYFGPNYRLHIEQSNANNENNP ELLTKLQADVIANLEKLTFVPSVQMRPIEDDALRSMNDSSALVDMADPDRRLPAEVTDQM IQDEGDFYDGEREGDDRRNESDGKRAAQLDSEGGK NT seq 1368 nt NT seq  +upstreamnt  +downstreamnt atgaactcgaacggccctcttcaagagcatggcaaacgacgtgttgcatattactacgac tcaaacattggaaactactactacggacagggtcatgtcatgaaaccgcatcgtatccgc atgactcatcatctggttttgaactatggactctaccggagtatggaaatctttcgtcca ttcccagcaacttttgacgacatgactcgattccatagcgaggagtacatgttgttcttg aaatccgccaacccagacaatttgaagtctttcaacaaacaaatgttgaaattcaatgtc ggagaagattgtccactgtttgatggtctctatgagttctgccagctcagctctggaggc tctctggctgctgccactaagctcaacaagcagaaggtggacattgcaatcaactggatg ggaggacttcaccacgccaagaagagcgaggcttctggattctgctacaccaacgacatt gttcttggtattctcgagcttctcaagtaccacaagcgtgttctgtacgtcgatatcgat gttcatcacggagatggtgtcgaggaggctttttatacaaccgatcgcgtcatgactgtg tcattccacaagtacggagatttcttcccaggaactggagatctgaaggatattggagcc gggaagggaaagctctactccgtcaatgttccacttcgtgatggaatcaccgactcgtcg tatcaaagcattttcaagccaatcatgaccaaagtcatggaacgtttcgatccatccgcc gtcgttcttcaatgtggagctgattcgttgaatggagaccgactcggaccattcaatctc acattgaagggacacggagagtgcgctcgcttcttccgaagctacaatgtcccacttatg atggttggaggaggtggatatactccacgaaacgttgcccggtgttggacatacgagaca tcgatcgctgttgacagagaggtcgcaaatgagttgccatacaatgactattttgagtac ttcggaccaaattaccgtcttcatattgaacaatccaatgccaataacgagaacaaccca gaacttctgaccaagcttcaagctgatgttattgccaacctcgaaaaactcacatttgtt ccgagtgttcaaatgagaccaatcgaagacgatgctctgaggtcaatgaatgacagttcg gctcttgttgacatggcggatccagatcgacgcctaccagcagaggtcaccgatcagatg atccaagacgaaggggacttttacgatggggaacgtgaaggagatgatcgcaggaacgag agtgatggaaagagagcagctcagttggactcagaaggcggaaagtag

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